RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 KPNA5O15131 536 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 LRRTM2O43300 516 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 HNRNPRO43390 633 aaKnown RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 OR1I1O60431 355 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 GOT2P00505 430 aaKnown RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 PEBP1P30086 187 aaKnown RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 CCR7P32248 378 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 GRIA3P42263 894 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 GCGRP47871 477 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 CSE1LP55060 971 aaKnown RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 FOXL2P58012 376 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 PRAMEP78395 509 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 OCA2Q04671 838 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 NAA30Q147X3 362 aaPredicted RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 TMED2Q15363 201 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 CCDC38Q502W7 563 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 FASTKD1Q53R41 847 aaKnown RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 AARS2Q5JTZ9 985 aaKnown RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 TSTD2Q5T7W7 516 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 RPUSD3Q6P087 351 aaKnown RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 AADACL2Q6P093 401 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 FAM180AQ6UWF9 173 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 PPP1R21Q6ZMI0 780 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 PEX26Q7Z412 305 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 TICAM1Q8IUC6 712 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 FAM20CQ8IXL6 584 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 SYCE1Q8N0S2 351 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 C2orf73Q8N5S3 287 aaPredicted RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 OR52K1Q8NGK4 314 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 OR6P1Q8NGX9 317 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 OR2L8Q8NGY9 312 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 OR4L1Q8NH43 312 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 PEX13Q92968 403 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 RAD51AP1Q96B01 352 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 THOC3Q96J01 351 aaKnown RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 PANX3Q96QZ0 392 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 PANX2Q96RD6 677 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 SELENOSQ9BQE4 189 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 TMEM121Q9BTD3 319 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 ENAMQ9NRM1 1142 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 PIH1D1Q9NWS0 290 aaKnown RBP8.79□□□□□ -1
HDDC3-204ENST00000559834 OSGIN2Q9Y236 505 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 NTNG1Q9Y2I2 539 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 KLHL20Q9Y2M5 609 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 HS3ST3B1Q9Y662 390 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 DUSP10Q9Y6W6 482 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 DYTNA2CJ06 578 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 HYKKA2RU49 373 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 FITM1A5D6W6 292 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 VSTM2BA6NLU5 285 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 MIF4GDA9UHW6 222 aaKnown RBP8.78□□□□□ -1
HDDC3-204ENST00000559834 RASGRF2O14827 1237 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 GPC4O75487 556 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 SLCO2B1O94956 709 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 HPP00738 406 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 MYBL2P10244 700 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 FDFT1P37268 417 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 OR1D4P47884 311 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 MFAP5Q13361 173 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 NAA25Q14CX7 972 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 ZRSR2Q15696 482 aaKnown RBP8.78□□□□□ -1
HDDC3-204ENST00000559834 WASHC2DQ5SRD0 308 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 C1QL3Q5VWW1 255 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 SP5Q6BEB4 398 aaPredicted RBP8.78□□□□□ -1
HDDC3-204ENST00000559834 PTRHD1Q6GMV3 140 aaKnown RBP8.78□□□□□ -1
HDDC3-204ENST00000559834 PRMT9Q6P2P2 845 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 SHISA6Q6ZSJ9 500 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 TXLNBQ8N3L3 684 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 TAB3Q8N5C8 712 aaPredicted RBP8.78□□□□□ -1
HDDC3-204ENST00000559834 BCORP1Q8N888 145 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 LMNTD1Q8N9Z9 388 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 LINC01555Q8NAE3 123 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 OR11G2Q8NGC1 345 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 OR13J1Q8NGT2 312 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 MAGEC3Q8TD91 643 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 MOCOSQ96EN8 888 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 FOPNLQ96NB1 174 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 ZNF285Q96NJ3 590 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 SPSB2Q99619 263 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 CRB3Q9BUF7 120 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 SOX17Q9H6I2 414 aaPredicted RBP8.78□□□□□ -1
HDDC3-204ENST00000559834 ZNF304Q9HCX3 659 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 ZNF282Q9UDV7 671 aaPredicted RBP8.78□□□□□ -1
HDDC3-204ENST00000559834 CDC14AQ9UNH5 594 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 ENTPD4Q9Y227 616 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 FAM169AQ9Y6X4 670 aa8.78□□□□□ -1
HDDC3-204ENST00000559834 PCSK5Q92824 1860 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 RCCD1A6NED2 376 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 MAP2K7O14733 419 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 PRMT5O14744 637 aaPredicted RBP8.77□□□□□ -1.01
HDDC3-204ENST00000559834 ALOX12BO75342 701 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 JRKO75564 520 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 USP1O94782 785 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 SUN1O94901 812 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 STSP08842 583 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 ACPPP15309 386 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 FDXRP22570 491 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 CXCR2P25025 360 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 MCM3P25205 808 aa8.77□□□□□ -1.01
HDDC3-204ENST00000559834 AOAHP28039 575 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 623.3 ms