RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 CHDHQ8NE62 594 aaPredicted RBP9.77□□□□□ -0.84
LRRC28-216ENST00000559819 BPIFB6Q8NFQ5 453 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 OR13F1Q8NGS4 319 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 CDC26Q8NHZ8 85 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 TANKQ92844 425 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 ECHDC3Q96DC8 303 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 DOK1Q99704 481 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 YTHDF1Q9BYJ9 559 aaKnown RBP9.77□□□□□ -0.84
LRRC28-216ENST00000559819 LHPPQ9H008 270 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 KCNH6Q9H252 994 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 BRD9Q9H8M2 597 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 RHBDL2Q9NX52 303 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 FBXO10Q9UK96 956 aa9.77□□□□□ -0.84
LRRC28-216ENST00000559819 ZNF106Q9H2Y7 1883 aaKnown RBP9.77□□□□□ -0.84
LRRC28-216ENST00000559819 OBSL1O75147 1896 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 C16orf96A6NNT2 1141 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF701M0R085 212 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF682O95780 498 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 HTR1AP08908 422 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 NR4A1P22736 598 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 HALP42357 657 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 TLE2Q04725 743 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 CD47Q08722 323 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 BNIP3Q12983 259 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 TRIM60Q495X7 471 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 LRIF1Q5T3J3 769 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 BROXQ5VW32 411 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 ATG9BQ674R7 924 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 ANKRD26P1Q6NSI1 321 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 FAM43BQ6ZT52 329 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-216ENST00000559819 LRRC70Q7Z2Q7 622 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 GALNT5Q7Z7M9 940 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 ZC3H7AQ8IWR0 971 aaKnown RBP9.77□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF555Q8NEP9 628 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 TBC1D15Q8TC07 691 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 ASB11Q8WXH4 323 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 ABTB1Q969K4 478 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-216ENST00000559819 THAP11Q96EK4 314 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 SH3GL1Q99961 368 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 SLC12A9Q9BXP2 914 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 SLC46A2Q9BY10 475 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 AASSQ9UDR5 926 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 CDH7Q9ULB5 785 aa9.77□□□□□ -0.85
LRRC28-216ENST00000559819 PLXNB3Q9ULL4 1909 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 TMEM202A6NGA9 273 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 AXIN1O15169 862 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ERN1O75460 977 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 DIRAS1O95057 198 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 TFPTP0C1Z6 253 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 SPINT3P49223 89 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CARD16Q5EG05 197 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CYP2U1Q7Z449 544 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 TMEM25Q86YD3 366 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 GALNT13Q8IUC8 556 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 TMEM132CQ8N3T6 1108 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CPXM2Q8N436 756 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 DRAXINQ8NBI3 349 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 PJA1Q8NG27 643 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 OR7A2PQ8NGA2 310 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF420Q8TAQ5 688 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 MCCC1Q96RQ3 725 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 SPG21Q9NZD8 308 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 SNX6Q9UNH7 406 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 MAN2B2Q9Y2E5 1009 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 IGLV3-16A0A075B6K0 115 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 PER2O15055 1255 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ABCB7O75027 752 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 HIST1H2AGP0C0S8 130 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CYP4B1P13584 511 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF182P17025 639 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 AMD1P17707 334 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CD22P20273 847 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 HIST1H2ADP20671 130 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CCR2P41597 374 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 SLC7A9P82251 487 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 IL1RL1Q01638 556 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CHIT1Q13231 466 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 DDX39BQ13838 428 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 C6orf141Q5SZD1 244 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 TTC23Q5W5X9 447 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ADNP2Q6IQ32 1131 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 DDX53Q86TM3 631 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CHPFQ8IZ52 775 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 SPARTQ8N0X7 666 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 EID3Q8N140 333 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 OR5K1Q8NHB7 308 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 PNPT1Q8TCS8 783 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ELMO1Q92556 727 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF689Q96CS4 500 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 PYURFQ96I23 114 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 HIST1H2AHQ96KK5 128 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CSF3RQ99062 836 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 HIST1H2AJQ99878 128 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 RBM4BQ9BQ04 359 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CORO1BQ9BR76 489 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 H2AFJQ9BTM1 129 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 RBM4Q9BWF3 364 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 MTG2Q9H4K7 406 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 HCFC1R1Q9NWW0 138 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 USE1Q9NZ43 259 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms