RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 DNAJC8O75937 253 aaPredicted RBP16.07■□□□□ 0.16
TPM1-219ENST00000559397 MATN4O95460 622 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 JUNP05412 331 aaKnown RBP16.07■□□□□ 0.16
TPM1-219ENST00000559397 SLC35G4P0C7Q5 338 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 NCF1P14598 390 aaPredicted RBP16.07■□□□□ 0.16
TPM1-219ENST00000559397 INHBCP55103 352 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 ABRQ12979 859 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 LCP2Q13094 533 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 RPE65Q16518 533 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 PHKG1Q16816 387 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 DBX2Q6ZNG2 339 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 AFAP1L2Q8N4X5 818 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 PATE1Q8WXA2 126 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 ASB11Q8WXH4 323 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 OR52B2Q96RD2 323 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 TUBB6Q9BUF5 446 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 EDEM2Q9BV94 578 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 NUF2Q9BZD4 464 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 ZBTB26Q9HCK0 441 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 TXLNGQ9NUQ3 528 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 UTP6Q9NYH9 597 aaKnown RBP16.07■□□□□ 0.16
TPM1-219ENST00000559397 PCDHGB2Q9Y5G2 931 aa16.07■□□□□ 0.16
TPM1-219ENST00000559397 TNPO3Q9Y5L0 923 aaKnown RBP16.07■□□□□ 0.16
TPM1-219ENST00000559397 TRPC5OSA6NMA1 111 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 OR52A4PA6NMU1 304 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 GFYI3L273 518 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 E2F3O00716 465 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 PPP6CO00743 305 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 SLC16A5O15375 505 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 C8GP07360 202 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 ENO2P09104 434 aaPredicted RBP16.06■□□□□ 0.16
TPM1-219ENST00000559397 TSPAN8P19075 237 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 UGT3A2Q3SY77 523 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 C6orf132Q5T0Z8 1188 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 SULT1C3Q6IMI6 304 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 C17orf82Q86X59 251 aaPredicted RBP16.06■□□□□ 0.16
TPM1-219ENST00000559397 CLYBLQ8N0X4 340 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 AGAP11Q8TF27 550 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 UBTD2Q8WUN7 234 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 TFGQ92734 400 aaPredicted RBP16.06■□□□□ 0.16
TPM1-219ENST00000559397 CCDC106Q9BWC9 280 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 SLC12A9Q9BXP2 914 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 TCF7L2Q9NQB0 619 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 ARL8BQ9NVJ2 186 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 NLGN3Q9NZ94 848 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 ZNF624Q9P2J8 865 aaPredicted RBP16.06■□□□□ 0.16
TPM1-219ENST00000559397 ASB1Q9Y576 335 aa16.06■□□□□ 0.16
TPM1-219ENST00000559397 OR5K4A6NMS3 321 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 B4DGG1 531 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 IFRD1O00458 451 aaPredicted RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 TRIM38O00635 465 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 SDHDO14521 159 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 TAPBPO15533 448 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 NOBOXO60393 691 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 MLYCDO95822 493 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 S100BP04271 92 aaPredicted RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 SLC19A1P41440 591 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 HALP42357 657 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 CDKL1Q00532 357 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 BTKQ06187 659 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 SP140Q13342 867 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 TBCCQ15814 346 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 METTL2BQ6P1Q9 378 aaKnown RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 TREML1Q86YW5 311 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 SFRP1Q8N474 314 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 OR4C6Q8NH72 309 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 TRPC4APQ8TEL6 797 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 RHBDF1Q96CC6 855 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 PTCD3Q96EY7 689 aaKnown RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 C12orf66Q96MD2 445 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 WDR55Q9H6Y2 383 aaPredicted RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 MEAF6Q9HAF1 191 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 TMEM9BQ9NQ34 198 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 ARMCX1Q9P291 453 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 CFAP20Q9Y6A4 193 aaKnown RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 TRBV23OR9-2A0A075B6M9 112 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 KIR2DS5A0A0G2JLQ3 304 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 A0A0G2JNG1 304 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 KIR2DS3K7RE56 304 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 FOXD2O60548 495 aaPredicted RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 PSIP1O75475 530 aaKnown RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 CBX6O95503 412 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 MTHFD1P11586 935 aaKnown RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 XRCC1P18887 633 aaPredicted RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 UBE2IP63279 158 aaKnown RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 KIR2DS5Q14953 304 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 PDCD2Q16342 344 aaPredicted RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 LSM12Q3MHD2 195 aaKnown RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 FBXO48Q5FWF7 155 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 DUS1LQ6P1R4 473 aaKnown RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 UNC5DQ6UXZ4 953 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 ACAD11Q709F0 780 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 ASRGL1Q7L266 308 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 GPR156Q8NFN8 814 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 SLC37A2Q8TED4 501 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 SKA2Q8WVK7 121 aaPredicted RBP16.05■□□□□ 0.16
TPM1-219ENST00000559397 NSL1Q96IY1 281 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 HGH1Q9BTY7 390 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 DUSP23Q9BVJ7 150 aa16.05■□□□□ 0.16
TPM1-219ENST00000559397 PARVBQ9HBI1 364 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms