RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 TMEM165Q9HC07 324 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 TM9SF3Q9HD45 589 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 VAPAQ9P0L0 249 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 ANKMY1Q9P2S6 941 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 OPTCQ9UBM4 332 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 GIMAP2Q9UG22 337 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 TMEFF2Q9UIK5 374 aaPredicted RBP6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 BAG5Q9UL15 447 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 PPT2Q9UMR5 302 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 SAMD4AQ9UPU9 718 aaKnown RBP6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 UGT2A1Q9Y4X1 527 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 LAMA3Q16787 3333 aa6.3□□□□□ -1.4
AC087516.2-201ENST00000558963 MN1Q10571 1320 aaPredicted RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 WASH3PC4AMC7 463 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SLC1A7O00341 560 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 QSOX1O00391 747 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CXCR6O00574 342 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 PER2O15055 1255 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 OR1I1O60431 355 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 NDUFS2O75306 463 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 PRKAR2AP13861 404 aaKnown RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 GPX2P18283 190 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 EPORP19235 508 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 PPIBP23284 216 aaKnown RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 EEF1B2P24534 225 aaKnown RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 MTHFRP42898 656 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SERPINB10P48595 397 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 RAD23AP54725 363 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 RPS24P62847 133 aaKnown RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SLC7A9P82251 487 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 RAB33AQ14088 237 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 NR6A1Q15406 480 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 MAPKAPK3Q16644 382 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 HKDC1Q2TB90 917 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SYT6Q5T7P8 510 aaPredicted RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 RETSATQ6NUM9 610 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 TMEM53Q6P2H8 277 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 TUBA3EQ6PEY2 450 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 HTR3DQ70Z44 454 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 RTL10Q7L3V2 364 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CHST15Q7LFX5 561 aaPredicted RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SERPINA9Q86WD7 417 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 TCEAL8Q8IYN2 117 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 TMEM132CQ8N3T6 1108 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 RYBPQ8N488 228 aaPredicted RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 TMCO5AQ8N6Q1 288 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 FBXO15Q8NCQ5 510 aaPredicted RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 BPIFB6Q8NFQ5 453 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 OR6Q1Q8NGQ2 317 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ZNF461Q8TAF7 563 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ADAMTS19Q8TE59 1207 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 EXT2Q93063 718 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SLC47A1Q96FL8 570 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 HEPHQ9BQS7 1158 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 BTBD2Q9BX70 525 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 AMBRA1Q9C0C7 1298 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 BRF2Q9HAW0 419 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CPNE5Q9HCH3 593 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ABCB8Q9NUT2 735 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 FAM120CQ9NX05 1096 aaKnown RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ZDHHC3Q9NYG2 299 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SLAMF8Q9P0V8 285 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 DAPK2Q9UIK4 370 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SNX6Q9UNH7 406 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CORO2BQ9UQ03 480 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 NOD1Q9Y239 953 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CEP350Q5VT06 3117 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 B4GAT1O43505 415 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CLDN9O95484 217 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SRPRAP08240 638 aaKnown RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 PRSS56P0CW18 603 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 EPB42P16452 691 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CD40LGP29965 261 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 DCTP40126 519 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CASP2P42575 452 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CDKN1CP49918 316 aaPredicted RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ECT2LQ008S8 904 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SRSF11Q05519 484 aaKnown RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CD47Q08722 323 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 DUSP4Q13115 394 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 SELPLGQ14242 412 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 DGUOKQ16854 277 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CTU2Q2VPK5 515 aaKnown RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ZRANB3Q5FWF4 1079 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 LIPJQ5W064 366 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 KDM4DQ6B0I6 523 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 FAHD1Q6P587 224 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 PLEKHG7Q6ZR37 379 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ABI1Q8IZP0 508 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 CADM3Q8N126 398 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 DYNC2LI1Q8TCX1 351 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 FAR1Q8WVX9 515 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 FCGR1BQ92637 280 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 PYURFQ96I23 114 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ZNF300Q96RE9 604 aaPredicted RBP6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 NODALQ96S42 347 aa6.29□□□□□ -1.4
AC087516.2-201ENST00000558963 ACOX2Q99424 681 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms