RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 RASGEF1BQ0VAM2 473 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 HYAL1Q12794 435 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 NONOQ15233 471 aaKnown RBP eCLIP1.53□□□□□ -2.16
USP3-209ENST00000558925 TWIST1Q15672 202 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 NPTX1Q15818 432 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PTGISQ16647 500 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 UGCGQ16739 394 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 HFEQ30201 348 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 IQCCQ4KMZ1 466 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 XKR3Q5GH77 459 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 DCAF10Q5QP82 559 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 SFMBT2Q5VUG0 894 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 IRAK1BP1Q5VVH5 260 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 C9orf57Q5W0N0 161 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 TRNP1Q6NT89 227 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PRSS57Q6UWY2 283 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PACS1Q6VY07 963 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 C15orf39Q6ZRI6 1047 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 LINC00696Q6ZRV3 163 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 C9orf47Q6ZRZ4 202 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 MSANTD1Q6ZTZ1 278 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 IL17RELQ6ZVW7 336 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 KCTD8Q6ZWB6 473 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PLEKHM3Q6ZWE6 761 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 KCTD9Q7L273 389 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 C16orf82Q7Z2V1 217 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 NRARPQ7Z6K4 114 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 RTN4RL2Q86UN3 420 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 DZIP1Q86YF9 867 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 FOXP4Q8IVH2 680 aaPredicted RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 CTAGE4Q8IX94 777 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 AQP12AQ8IXF9 295 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 CIARTQ8N365 385 aaPredicted RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 CHCHD4Q8N4Q1 142 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 DNAJC22Q8N4W6 341 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ZNF611Q8N823 705 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 SPC24Q8NBT2 197 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 KBTBD8Q8NFY9 601 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 OR1J1Q8NGS3 322 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 MAGEC3Q8TD91 643 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ST7LQ8TDW4 575 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 GRHL3Q8TE85 626 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 AFAP1L1Q8TED9 768 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ATL1Q8WXF7 558 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 SORCS1Q8WY21 1168 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 IRGQQ8WZA9 623 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PROX1Q92786 737 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 DNASE1L2Q92874 299 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 WBP2Q969T9 261 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 TEKT1Q969V4 418 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 DHX58Q96C10 678 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 THOC1Q96FV9 657 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 BICD1Q96G01 975 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ERO1AQ96HE7 468 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 FAM71F1Q96KD3 344 aaPredicted RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 C17orf77Q96MU5 243 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ZNF385AQ96PM9 386 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 MYADMQ96S97 322 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 HNRNPABQ99729 332 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 EGFL8Q99944 293 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PSD2Q9BQI7 771 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PIGQQ9BRB3 760 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 MRPL9Q9BYD2 267 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 SLC5A7Q9GZV3 580 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 DBNDD1Q9H9R9 158 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 UBTD1Q9HAC8 227 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 TUFT1Q9NNX1 390 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 KLHL1Q9NR64 748 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 OLFML3Q9NRN5 406 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ABCB8Q9NUT2 735 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ZNF701Q9NV72 531 aaPredicted RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 AKAP7Q9P0M2 348 aaPredicted RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 CDH7Q9ULB5 785 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 LIPT1Q9Y234 373 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 RIPK3Q9Y572 518 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ACEP12821 1306 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PLSCR5A0PG75 271 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 C5orf51A6NDU8 294 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 OOEPA6NGQ2 149 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 CASTOR2A6NHX0 329 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 C15orf62A8K5M9 175 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 TULP2O00295 520 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 RTCAO00442 366 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 FPGTO14772 594 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 IFIT3O14879 490 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 FLRT2O43155 660 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 TTI1O43156 1089 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 BUD23O43709 281 aaKnown RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 CTSVO60911 334 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 KERAO60938 352 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 AKAP3O75969 853 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PDE9AO76083 593 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 GAS8-AS1O95177 125 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PGLSO95336 258 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 PAPSS2O95340 614 aaPredicted RBP1.52□□□□□ -2.17
USP3-209ENST00000558925 SLC16A8O95907 504 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 NR3C1P04150 777 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SERPING1P05155 500 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SBK2P0C263 348 aa1.52□□□□□ -2.17
USP3-209ENST00000558925 SPP1P10451 314 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms