RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 STT3BQ8TCJ2 826 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 C8orf44Q96CB5 159 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 LRRC45Q96CN5 670 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 IQCDQ96DY2 449 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 BPIFA3Q9BQP9 254 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 GBA3Q9H227 469 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 GPAMQ9HCL2 828 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 ZNF304Q9HCX3 659 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 LUC7LQ9NQ29 371 aaKnown RBP17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 ZNF282Q9UDV7 671 aaPredicted RBP17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 C3orf18Q9UK00 162 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 CAPN11Q9UMQ6 739 aa17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 AAR2Q9Y312 384 aaKnown RBP17.04■□□□□ 0.32
TSPAN3-204ENST00000558394 NF1P21359 2839 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 HACD1B0YJ81 288 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 CCL22O00626 93 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 BMP10O95393 424 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 SERPINA7P05543 415 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 ZGLP1P0C6A0 271 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 TMEM253P0C7T8 217 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 ACADLP28330 430 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 SOX11P35716 441 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 CDKN1CP49918 316 aaPredicted RBP17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 ZNF140P52738 457 aaPredicted RBP17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 ADORA2A-AS1P86434 159 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 PLOD1Q02809 727 aaPredicted RBP17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 RANBP10Q6VN20 620 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 HAUS1Q96CS2 278 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 C19orf43Q9BQ61 176 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 SMARCAL1Q9NZC9 954 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 NAV3Q8IVL0 2385 aa17.03■□□□□ 0.32
TSPAN3-204ENST00000558394 NCOA6Q14686 2063 aaPredicted RBP17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 C19orf84I3L1E1 186 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 FANCGO15287 622 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 MLYCDO95822 493 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 PEBP1P30086 187 aaKnown RBP17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 GRIA3P42263 894 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 CDKN2BP42772 138 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 SLC1A1P43005 524 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 AP2B1P63010 937 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 SRSF11Q05519 484 aaKnown RBP17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 SLC18A3Q16572 532 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 C3AR1Q16581 482 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 LONRF1Q17RB8 773 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 FIGLAQ6QHK4 219 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 QKIQ96PU8 341 aaKnown RBP eCLIP17.02■□□□□ 0.323e-6■□□□□ 10.1
TSPAN3-204ENST00000558394 MCCC2Q9HCC0 563 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 TINAGQ9UJW2 476 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 NENFQ9UMX5 172 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 FAM169AQ9Y6X4 670 aa17.02■□□□□ 0.32
TSPAN3-204ENST00000558394 H7C0C1 242 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 SPOPO43791 374 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 PRAMEF2O60811 474 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 NADKO95544 446 aaPredicted RBP17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 WDPCPO95876 746 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 S1PR4O95977 384 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 RPN2P04844 631 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 TPBGLP0DKB5 382 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 ATP5OP48047 213 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 VSX2P58304 361 aaPredicted RBP17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 CACNG1Q06432 222 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 SF1Q15637 639 aaKnown RBP17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 ABHD17BQ5VST6 288 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 ATG9BQ674R7 924 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 PRMT9Q6P2P2 845 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 RIPOR1Q6ZS17 1223 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 TAX1BP1Q86VP1 789 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 RHOT2Q8IXI1 618 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 C2orf73Q8N5S3 287 aaPredicted RBP17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 PSMF1Q92530 271 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 DNAJC1Q96KC8 554 aaKnown RBP17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 SPOCK3Q9BQ16 436 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 MESP1Q9BRJ9 268 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 YIPF2Q9BWQ6 316 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 RIC8BQ9NVN3 520 aa17.01■□□□□ 0.31
TSPAN3-204ENST00000558394 TRBV5-4A0A0C4DH59 114 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 HYKKA2RU49 373 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 F8W8V4 182 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 COX6A1P12074 109 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 FBLP22087 321 aaKnown RBP17■□□□□ 0.31
TSPAN3-204ENST00000558394 PKLRP30613 574 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 ADRA1AP35348 466 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 KIR3DL1P43629 444 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 EMP2P54851 167 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 EEF1A2Q05639 463 aaKnown RBP17■□□□□ 0.31
TSPAN3-204ENST00000558394 OLIG2Q13516 323 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 WASHC2DQ5SRD0 308 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 HIBCHQ6NVY1 386 aaPredicted RBP17■□□□□ 0.31
TSPAN3-204ENST00000558394 ARHGEF18Q6ZSZ5 1173 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 CPAMD8Q8IZJ3 1885 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 ALS2CR12Q96Q35 445 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 RNF32Q9H0A6 362 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 FEZ2Q9UHY8 353 aaPredicted RBP17■□□□□ 0.31
TSPAN3-204ENST00000558394 TEKT2Q9UIF3 430 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 NEU2Q9Y3R4 380 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 HYOU1Q9Y4L1 999 aa17■□□□□ 0.31
TSPAN3-204ENST00000558394 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17■□□□□ 0.31
TSPAN3-204ENST00000558394 OR5H15A6NDH6 313 aa16.99■□□□□ 0.31
TSPAN3-204ENST00000558394 FAM227AF5H4B4 570 aa16.99■□□□□ 0.31
TSPAN3-204ENST00000558394 SRPX2O60687 465 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms