RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PCDHGB6Q9Y5F9 930 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 BZW2Q9Y6E2 419 aaKnown RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 PRRC2AP48634 2157 aaKnown RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 PRRC2CQ9Y520 2896 aaKnown RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 ZFHX3Q15911 3703 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 ABCA2Q9BZC7 2435 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 OTOGQ6ZRI0 2925 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 OR5H15A6NDH6 313 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 C5orf60A6NFR6 353 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 AGAP14A8MT82 685 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 ZNF487B1APH4 448 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 GAPDHSO14556 408 aaPredicted RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 TTI1O43156 1089 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 GPR39O43194 453 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 SGTAO43765 313 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 SRPX2O60687 465 aaPredicted RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 SNRNP200O75643 2136 aaKnown RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 PROSCO94903 275 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 CRTAMO95727 393 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 AP2A1O95782 977 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 F10P00742 488 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 ZGLP1P0C6A0 271 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 FOSL1P15407 271 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 ITGALP20701 1170 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 PTMSP20962 102 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 ARHGAP25P42331 645 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 NR2C2P49116 596 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 EMP2P54851 167 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 MYL5Q02045 173 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 ALDH6A1Q02252 535 aaKnown RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 PLOD1Q02809 727 aaPredicted RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 CACNG1Q06432 222 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 KLC1Q07866 573 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 MPP3Q13368 585 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 PTPRCAPQ14761 206 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 NOMO1Q15155 1222 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 CDSNQ15517 529 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 NFKBIBQ15653 356 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 GPR33Q49SQ1 333 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 FILIP1LQ4L180 1135 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 ZNF766Q5HY98 468 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 FAM182AQ5T1J6 154 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 SLC9A4Q6AI14 798 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 PRMT9Q6P2P2 845 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 CNSTQ6PJW8 725 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 KDELC1Q6UW63 502 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 Q6ZPB1 254 aaPredicted RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 COX15Q7KZN9 410 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 NLRP9Q7RTR0 991 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 PID1Q7Z2X4 250 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 SNX20Q7Z614 316 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 VSIG1Q86XK7 387 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 FAM20CQ8IXL6 584 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 SIRT6Q8N6T7 355 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 PLD5Q8N7P1 536 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 DNAAF3Q8N9W5 541 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 ACBD4Q8NC06 268 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 IPMKQ8NFU5 416 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 OR4K2Q8NGD2 314 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 STT3BQ8TCJ2 826 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 PHF10Q8WUB8 498 aaKnown RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 NAT14Q8WUY8 206 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 TFB1MQ8WVM0 346 aaKnown RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 RAPGEF5Q92565 580 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 ZUFSPQ96AP4 578 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 SLC22A18Q96BI1 424 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 SDCCAG3Q96C92 435 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 GPR137Q96N19 417 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 FCRL5Q96RD9 977 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 VAT1Q99536 393 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 NRTNQ99748 197 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 FOXC2Q99958 501 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 TREX2Q9BQ50 279 aaPredicted RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 ZNF559Q9BR84 538 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 SLC24A3Q9HC58 644 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 LUC7LQ9NQ29 371 aaKnown RBP4.95□□□□□ -1.62
SPG11-208ENST00000558155 ANO10Q9NW15 660 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 SPHK1Q9NYA1 384 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 ZDHHC3Q9NYG2 299 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 TNFRSF10DQ9UBN6 386 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 TINAGQ9UJW2 476 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 C3orf18Q9UK00 162 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 CDC14AQ9UNH5 594 aa4.95□□□□□ -1.62
SPG11-208ENST00000558155 MTORP42345 2549 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 SCN2AQ99250 2005 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 HYKKA2RU49 373 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 LRRD1A4D1F6 860 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 FITM1A5D6W6 292 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 A8MUI8 341 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 TARM1B6A8C7 271 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 NPIPA5E9PKD4 350 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 E9PLN8 166 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 FAM227AF5H4B4 570 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 QSOX1O00391 747 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 PRRG2O14669 202 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 LIN7AO14910 233 aaPredicted RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 ASNA1O43681 348 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 AP2A2O94973 939 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 FKBP9O95302 570 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms