RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 STRA8Q7Z7C7 330 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 CCDC25Q86WR0 208 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 CPNE9Q8IYJ1 553 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 ESX1Q8N693 406 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 C19orf47Q8N9M1 422 aaKnown RBP12.06□□□□□ -0.48
SLIRP-211ENST00000557623 LINC01555Q8NAE3 123 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 FLVCR1-AS1Q8TAF5 88 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 ASB11Q8WXH4 323 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 ZNF501Q96CX3 271 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-211ENST00000557623 ELMO2Q96JJ3 720 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 IL17FQ96PD4 163 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 EFHD1Q9BUP0 239 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 CHRNA10Q9GZZ6 450 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 TSPYL1Q9H0U9 437 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 PRORYQ9H606 182 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 PRDM9Q9NQV7 894 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-211ENST00000557623 TXNDC16Q9P2K2 825 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 SLC17A6Q9P2U8 582 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 MTRF1LQ9UGC7 380 aaKnown RBP12.06□□□□□ -0.48
SLIRP-211ENST00000557623 CIDEBQ9UHD4 219 aa12.06□□□□□ -0.48
SLIRP-211ENST00000557623 RUVBL2Q9Y230 463 aaKnown RBP12.06□□□□□ -0.48
SLIRP-211ENST00000557623 KMT2BQ9UMN6 2715 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 ESYT3A0FGR9 886 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 ARHGEF33A8MVX0 844 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 GFYI3L273 518 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 MYO1CO00159 1063 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 KIAA0754O94854 1291 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 C8GP07360 202 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 PVRP15151 417 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 FDXRP22570 491 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 PEBP1P30086 187 aaKnown RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 STX2P32856 288 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 CDKN2DP55273 166 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 IL2P60568 153 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 CXADRP78310 365 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 VAC14Q08AM6 782 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 ABHD18Q0P651 414 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 NAA25Q14CX7 972 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 TRADDQ15628 312 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 SF1Q15637 639 aaKnown RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 GPR19Q15760 415 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 CYP2A13Q16696 494 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 CCSMST1Q4G0I0 132 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 PAQR3Q6TCH7 311 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 C6orf15Q6UXA7 325 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 GPR155Q7Z3F1 870 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 ZC3HC1Q86WB0 502 aaKnown RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 MYO1HQ8N1T3 1032 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 C2orf73Q8N5S3 287 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 ZSCAN1Q8NBB4 408 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 NOA1Q8NC60 698 aaKnown RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 N4BP2L2Q92802 583 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 KIAA1143Q96AT1 154 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-211ENST00000557623 SERTAD3Q9UJW9 196 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 DMXL2Q8TDJ6 3036 aa12.05□□□□□ -0.48
SLIRP-211ENST00000557623 FAM95CA0A1B0GW59 222 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 TCRBV9S1A1TA0A576 114 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 TMEM150CB9EJG8 249 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 K7ENP7 123 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 SLC16A5O15375 505 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 SYF2O95926 243 aaKnown RBP12.04□□□□□ -0.48
SLIRP-211ENST00000557623 CCNYL3P0C7X3 344 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 ERGP11308 486 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 ZNF28P17035 718 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 CYP2A7P20853 494 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 TIAL1Q01085 375 aaKnown RBP eCLIP12.04□□□□□ -0.48
SLIRP-211ENST00000557623 SP140Q13342 867 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 PWWP2BQ6NUJ5 590 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 INO80CQ6PI98 192 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-211ENST00000557623 UBE2R2Q712K3 238 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-211ENST00000557623 PIWIL4Q7Z3Z4 852 aaKnown RBP12.04□□□□□ -0.48
SLIRP-211ENST00000557623 TRIM73Q86UV7 250 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 TAX1BP1Q86VP1 789 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 TMEM126BQ8IUX1 230 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 LMNTD1Q8N9Z9 388 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 MCOLN3Q8TDD5 553 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 DENND1AQ8TEH3 1009 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 EEF1AKMT1Q8WVE0 214 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 SNRNP27Q8WVK2 155 aaKnown RBP12.04□□□□□ -0.48
SLIRP-211ENST00000557623 SMPDL3AQ92484 453 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 LINGO1Q96FE5 620 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 VPS39Q96JC1 886 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 PKP4Q99569 1192 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 CPNE1Q99829 537 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 FAM117AQ9C073 453 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 KLHL25Q9H0H3 589 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 RHOJQ9H4E5 214 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 CPNE5Q9HCH3 593 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 ZDHHC18Q9NUE0 388 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 PSAT1Q9Y617 370 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 CACNA1BQ00975 2339 aa12.04□□□□□ -0.48
SLIRP-211ENST00000557623 HEATR5BQ9P2D3 2071 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 PABPN1LA6NDY0 278 aaKnown RBP12.03□□□□□ -0.48
SLIRP-211ENST00000557623 FAM159BA6NKW6 160 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 TARM1B6A8C7 271 aa12.03□□□□□ -0.48
SLIRP-211ENST00000557623 PRICKLE3O43900 615 aaPredicted RBP12.03□□□□□ -0.48
SLIRP-211ENST00000557623 CPNE3O75131 537 aaKnown RBP12.03□□□□□ -0.48
SLIRP-211ENST00000557623 SCRG1O75711 98 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms