RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 NPIPB8E9PQR5 432 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 H3BNC9 293 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 TOR1BO14657 336 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 AREL1O15033 823 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 FAM20BO75063 409 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 MT-ND2P03891 347 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 BCKDHAP12694 445 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 EPB42P16452 691 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 PRPH2P23942 346 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 FMO3P31513 532 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 EIF2DP41214 584 aaKnown RBP15.89■□□□□ 0.13
SHMT2-232ENST00000557487 CLK3P49761 638 aaKnown RBP15.89■□□□□ 0.13
SHMT2-232ENST00000557487 VBP1P61758 197 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 NDUFA5Q16718 116 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 KIAA1614Q5VZ46 1190 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 ANKRD34AQ69YU3 496 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 ABI1Q8IZP0 508 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 EFHBQ8N7U6 833 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 TTC29Q8NA56 475 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF540Q8NDQ6 660 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 KLHDC9Q8NEP7 349 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 STARD8Q92502 1023 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 HPS1Q92902 700 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 EGFL8Q99944 293 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 BTBD2Q9BX70 525 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 CEP44Q9C0F1 390 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 SERHLQ9NQF3 203 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 PAK6Q9NQU5 681 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-232ENST00000557487 GREB1Q4ZG55 1949 aa15.89■□□□□ 0.13
SHMT2-232ENST00000557487 OR2A25A4D2G3 310 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 EVPLLA8MZ36 301 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 TLR5O60602 858 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 UPK1BO75841 260 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 EOMESO95936 686 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 RHOCP08134 193 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 PABPC1P11940 636 aaKnown RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 HMGCLP35914 325 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 THPOP40225 353 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 PPP3CCP48454 512 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 MASP1P48740 699 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 TRPC1P48995 793 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 DAPP51397 102 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 PHC1P78364 1004 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 AAK1Q2M2I8 961 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 C18orf21Q32NC0 220 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 INAVAQ3KP66 663 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 GNASQ5JWF2 1037 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 SUSD1Q6UWL2 747 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 DNAJC14Q6Y2X3 702 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 SLC38A4Q969I6 547 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ZHX1-C8orf76Q96EF9 292 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 TXNDC15Q96J42 360 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 SIGLEC11Q96RL6 698 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 CORO1BQ9BR76 489 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 KLHL25Q9H0H3 589 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 TNKS2Q9H2K2 1166 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ZFP14Q9HCL3 533 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ELOVL2Q9NXB9 296 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ZFP37Q9Y6Q3 630 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 MN1Q10571 1320 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 EFCAB9A8MZ26 197 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 F8W810 466 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 FABP3P05413 133 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 PRKAR2AP13861 404 aaKnown RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 S100A1P23297 94 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 MAP2K4P45985 399 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 RGS19P49795 217 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF177Q13360 481 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 GGTA1PQ4G0N0 100 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 CTXN3Q4LDR2 81 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 NCEH1Q6PIU2 408 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ANKRD12Q6UB98 2062 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF783Q6ZMS7 281 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 SLC22A16Q86VW1 577 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 PHACTR4Q8IZ21 702 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 CFAP52Q8N1V2 620 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 KRTCAP2Q8N6L1 136 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 MCFD2Q8NI22 146 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ITPAQ9BY32 194 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 CIPCQ9C0C6 399 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 RNF208Q9H0X6 261 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 MOV10Q9HCE1 1003 aaKnown RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 HMX1Q9NP08 348 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-232ENST00000557487 KLHL42Q9P2K6 505 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 DNMT3LQ9UJW3 386 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 ERVK-11Q9UQG0 969 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 TSC22D4Q9Y3Q8 395 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 PCDHGC4Q9Y5F7 938 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 U3KQV3 271 aa15.88■□□□□ 0.13
SHMT2-232ENST00000557487 TTC3P53804 2025 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 E9PQ18 207 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 FFAR3O14843 346 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 GPR42O15529 346 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 MITFO75030 526 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-232ENST00000557487 CLDN9O95484 217 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 SEMG1P04279 462 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 SLC6A4P31645 630 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 ALDH7A1P49419 539 aaKnown RBP15.87■□□□□ 0.13
SHMT2-232ENST00000557487 HMGCS1Q01581 520 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms