RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 TAF1BQ53T94 588 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 MANEAQ5SRI9 462 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 PCSK4Q6UW60 755 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 TMEM26Q6ZUK4 368 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 SYDE1Q6ZW31 735 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 AMZ2Q86W34 360 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 ZFAND4Q86XD8 727 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 ZNF761Q86XN6 746 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 TMEM139Q8IV31 216 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 TRIM48Q8IWZ4 208 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 KLHDC8BQ8IXV7 354 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 RNF10Q8N5U6 811 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 BEND7Q8N7W2 519 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 BMPERQ8N8U9 685 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 DDHD1Q8NEL9 900 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 ALG3Q92685 438 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 SPATA13Q96N96 652 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 ZPBPQ9BS86 351 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 C10orf88Q9H8K7 445 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 UGT1A7Q9HAW7 530 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 UGT1A10Q9HAW8 530 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 UGT1A8Q9HAW9 530 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 SLC39A1Q9NY26 324 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 FOXJ2Q9P0K8 574 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 TMEM9Q9P0T7 183 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 ZFYVE26Q68DK2 2539 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 LOC400499M0QZD8 3231 aa9.61□□□□□ -0.87
HNRNPC-228ENST00000557033 MACROD2A1Z1Q3 448 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 FAM90A27PA6NNH2 459 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 EFCAB7A8K855 629 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 AGAP14A8MT82 685 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 A8MU76 341 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 PDZK1P1A8MUH7 402 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 GNB5O14775 395 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 PTMAP06454 111 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 ANKRD34CP0C6C1 535 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 BRAFP15056 766 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 AMD1P17707 334 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 MSLNQ13421 630 aaPredicted RBP9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 PARP6Q2NL67 630 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 CYP27C1Q4G0S4 372 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 GPRC6AQ5T6X5 926 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 TMEM220Q6QAJ8 160 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 FAM151BQ6UXP7 276 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 FAM129CQ86XR2 697 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 TRAPPC5Q8IUR0 188 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 RASGEF1AQ8N9B8 481 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 OR4K2Q8NGD2 314 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 CCDC110Q8TBZ0 833 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 ART4Q93070 314 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 SGF29Q96ES7 293 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 MPP4Q96JB8 637 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 GORASP1Q9BQQ3 440 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 FICDQ9BVA6 458 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 TBC1D10AQ9BXI6 508 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 RAB33BQ9H082 229 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 VPS11Q9H270 941 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 KCNF1Q9H3M0 494 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 SLC40A1Q9NP59 571 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 DMRT3Q9NQL9 472 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 OCIAD1Q9NX40 245 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 DNAJC16Q9Y2G8 782 aa9.6□□□□□ -0.87
HNRNPC-228ENST00000557033 MN1Q10571 1320 aaPredicted RBP9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 PTPRQQ9UMZ3 2332 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 MGAT4DA6NG13 374 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 GOLGA6L6A8MZA4 724 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 GAPDHSO14556 408 aaPredicted RBP9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 PSMD3O43242 534 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 BUD23O43709 281 aaKnown RBP9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 SRP72O76094 671 aaKnown RBP9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 C9P02748 559 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 ITGB2P05107 769 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 MSH3P20585 1137 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 RPL10P27635 214 aaKnown RBP9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 PSMB4P28070 264 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 ADMP35318 185 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 HADHAP40939 763 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 MAPK9P45984 424 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 CLCA4Q14CN2 919 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 NKPD1Q17RQ9 610 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 METRNLQ641Q3 311 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 ANKS6Q68DC2 871 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 AADACL2Q6P093 401 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 CEACAM20Q6UY09 585 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 BEND4Q6ZU67 534 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 HEXDCQ8WVB3 486 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 ZFPM2Q8WW38 1151 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 UBE2FQ969M7 185 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 CXorf40BQ96DE9 158 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 ZDHHC12Q96GR4 267 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 HES6Q96HZ4 224 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 LINC00615Q96LM1 132 aaPredicted RBP9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 C9orf72Q96LT7 481 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 TBL1YQ9BQ87 522 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 SPRY4Q9C004 299 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 ASB8Q9H765 288 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 OGFRQ9NZT2 677 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 EPHA6Q9UF33 1036 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 DUSP13Q9UII6 198 aa9.59□□□□□ -0.87
HNRNPC-228ENST00000557033 ACSL5Q9ULC5 683 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms