RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 GLB1LQ6UWU2 654 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 RNF19BQ6ZMZ0 732 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 RTN4RL1Q86UN2 441 aaPredicted RBP11.11□□□□□ -0.63
SRP54-213ENST00000556994 CCDC71Q8IV32 467 aaPredicted RBP11.11□□□□□ -0.63
SRP54-213ENST00000556994 PLPP6Q8IY26 295 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 SETD9Q8NE22 299 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 OR52E4Q8NGH9 312 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 OR2T29Q8NH02 315 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 ACPTQ9BZG2 426 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 DSN1Q9H410 356 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 PARVBQ9HBI1 364 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 ZBTB20Q9HC78 741 aaPredicted RBP11.11□□□□□ -0.63
SRP54-213ENST00000556994 GKN1Q9NS71 199 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 IL17CQ9P0M4 197 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 LAMA3Q16787 3333 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 CHD5Q8TDI0 1954 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 PLXNA4Q9HCM2 1894 aa11.11□□□□□ -0.63
SRP54-213ENST00000556994 GLUD1P00367 558 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 PDYNP01213 254 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 ALOX5P09917 674 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 IRF1P10914 325 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 JUNDP17535 347 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 PSMA3P25788 255 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 CD40LGP29965 261 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 RCVRNP35243 200 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 KRT20P35900 424 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 CDH4P55283 916 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 FCGRTP55899 365 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 RPS14P62263 151 aaKnown RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 FAM189BP81408 668 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 VLDLRP98155 873 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 KDM4DQ6B0I6 523 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 ZCCHC8Q6NZY4 707 aaKnown RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 Q6ZPB1 254 aaPredicted RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 TRIM46Q7Z4K8 759 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 SNX20Q7Z614 316 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 TMEM132CQ8N3T6 1108 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 RNF175Q8N4F7 328 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 ZHX1-C8orf76Q96EF9 292 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 KCNH6Q9H252 994 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 AMBNQ9NP70 447 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 LATS2Q9NRM7 1088 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 AFF4Q9UHB7 1163 aaKnown RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 OARD1Q9Y530 152 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 HTTP42858 3142 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 EFCAB9A8MZ26 197 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 ERN1O75460 977 aaKnown RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 VNN2O95498 520 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 PRAMEF1O95521 474 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 CD160O95971 181 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 KLKB1P03952 638 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 EPB42P16452 691 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 EFNA1P20827 205 aaPredicted RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 PTPN6P29350 595 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 ALDH7A1P49419 539 aaKnown RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 ARHGDIAP52565 204 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 NKX2-5P52952 324 aaPredicted RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 ARF5P84085 180 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 SEMG2Q02383 582 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 CREMQ03060 361 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 OR4F3Q6IEY1 312 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 CAPN13Q6MZZ7 669 aaPredicted RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 FKBP9P1Q75LS8 142 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 UTS2BQ765I0 119 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 STK40Q8N2I9 435 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 ATG16L2Q8NAA4 619 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 RHOXF1Q8NHV9 184 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 MCFD2Q8NI22 146 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 PHF10Q8WUB8 498 aaKnown RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 GPR62Q9BZJ7 368 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 ASB8Q9H765 288 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 TRMT13Q9NUP7 481 aaKnown RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 SIRT5Q9NXA8 310 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 ANKMY1Q9P2S6 941 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 PPT2Q9UMR5 302 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 FCF1Q9Y324 198 aaKnown RBP11.1□□□□□ -0.63
SRP54-213ENST00000556994 PIKFYVEQ9Y2I7 2098 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 SCN10AQ9Y5Y9 1956 aa11.1□□□□□ -0.63
SRP54-213ENST00000556994 A0A096LPI6 279 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 MTMR11A4FU01 709 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 KRT87PA6NCN2 255 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 H7C0S8 307 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 RFXANKO14593 260 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 TBX1O43435 398 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 DUSP11O75319 330 aaKnown RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 FKBP9O95302 570 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 PGLSO95336 258 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 ZNF7P17097 686 aaPredicted RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 TGFBR2P37173 567 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 LIPAP38571 399 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 MAGEA2P43356 314 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 MAGEA11P43364 429 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 RGS4P49798 205 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 MVKQ03426 396 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 ZNF177Q13360 481 aaPredicted RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 KEAP1Q14145 624 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 MAD2L1BPQ15013 274 aaPredicted RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 CCDC92Q53HC0 331 aaPredicted RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 PRSS36Q5K4E3 855 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms