RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 SLC12A2P55011 1212 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 POU4F1Q01851 419 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 VAC14Q08AM6 782 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 ABHD18Q0P651 414 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 FASTKQ14296 549 aaKnown RBP10.3□□□□□ -0.76
LINC00239-201ENST00000556973 GRTP1Q5TC63 336 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 C6orf15Q6UXA7 325 aaPredicted RBP10.3□□□□□ -0.76
LINC00239-201ENST00000556973 TIPARPQ7Z3E1 657 aaKnown RBP10.3□□□□□ -0.76
LINC00239-201ENST00000556973 PIWIL4Q7Z3Z4 852 aaKnown RBP10.3□□□□□ -0.76
LINC00239-201ENST00000556973 TRIM73Q86UV7 250 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 IFT20Q8IY31 132 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 NKAPQ8N5F7 415 aaKnown RBP10.3□□□□□ -0.76
LINC00239-201ENST00000556973 ESX1Q8N693 406 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 LMNTD1Q8N9Z9 388 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 OR2A1Q8NGT9 310 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 FBF1Q8TES7 1133 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 SMPDL3AQ92484 453 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 ANKRD7Q92527 254 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 N4BP2L2Q92802 583 aaPredicted RBP10.3□□□□□ -0.76
LINC00239-201ENST00000556973 LINGO1Q96FE5 620 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 VPS39Q96JC1 886 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 HIST1H2AHQ96KK5 128 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 CCDC138Q96M89 665 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 FMO2Q99518 471 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 HIST1H2AJQ99878 128 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 H2AFJQ9BTM1 129 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 EFHD1Q9BUP0 239 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 TRIM54Q9BYV2 358 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 KLHL25Q9H0H3 589 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 FAM60AQ9NP50 221 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 WDR70Q9NW82 654 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 CEP295Q9C0D2 2601 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 DMXL2Q8TDJ6 3036 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 URB1O60287 2271 aaKnown RBP10.3□□□□□ -0.76
LINC00239-201ENST00000556973 CHD8Q9HCK8 2581 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 ACACBO00763 2458 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 A0A1W2PPV9 198 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 KRT87PA6NCN2 255 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 TMEM150CB9EJG8 249 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 K7ENP7 123 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 EFSO43281 561 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 SCRG1O75711 98 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 PIAS1O75925 651 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 KRT37O76014 449 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 TSPAN12O95859 305 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 SLC16A8O95907 504 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 C1QAP02745 245 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 NTRK1P04629 796 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 SAT1P21673 171 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 CMPK1P30085 196 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 RPA3P35244 121 aaPredicted RBP10.29□□□□□ -0.76
LINC00239-201ENST00000556973 SPRP35270 261 aaPredicted RBP10.29□□□□□ -0.76
LINC00239-201ENST00000556973 ITGA1P56199 1179 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 TAS2R39P59534 338 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 SP140Q13342 867 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 NAB1Q13506 487 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 NAA25Q14CX7 972 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 ZIC1Q15915 447 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 KBTBD12Q3ZCT8 623 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 ZC3H12BQ5HYM0 836 aaKnown RBP10.29□□□□□ -0.76
LINC00239-201ENST00000556973 KIAA1614Q5VZ46 1190 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 INO80CQ6PI98 192 aaPredicted RBP10.29□□□□□ -0.76
LINC00239-201ENST00000556973 FIGLAQ6QHK4 219 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 TMEM207Q6UWW9 146 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 CDHR3Q6ZTQ4 885 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 TAX1BP1Q86VP1 789 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 TMEM126BQ8IUX1 230 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 SPNS2Q8IVW8 549 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 CTAGE3PQ8IX95 158 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 DNAJC22Q8N4W6 341 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 PPM1NQ8N819 430 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 ZSCAN1Q8NBB4 408 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 OR1L3Q8NH93 324 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 ZNF480Q8WV37 535 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 SNRNP27Q8WVK2 155 aaKnown RBP10.29□□□□□ -0.76
LINC00239-201ENST00000556973 DLG3Q92796 817 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 TSPAN17Q96FV3 270 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 LRFN5Q96NI6 719 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 RBBP8Q99708 897 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 MIPEPQ99797 713 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 PRORYQ9H606 182 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 L2HGDHQ9H9P8 463 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 CPNE5Q9HCH3 593 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 ADAMTS6Q9UKP5 1117 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 PADI1Q9ULC6 663 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 PDE10AQ9Y233 779 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 MTO1Q9Y2Z2 717 aaKnown RBP10.29□□□□□ -0.76
LINC00239-201ENST00000556973 PCDHB3Q9Y5E6 796 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 KLK4Q9Y5K2 254 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 CELSR3Q9NYQ7 3312 aa10.29□□□□□ -0.76
LINC00239-201ENST00000556973 MAP1BP46821 2468 aaKnown RBP10.29□□□□□ -0.76
LINC00239-201ENST00000556973 PABPN1LA6NDY0 278 aaKnown RBP10.28□□□□□ -0.76
LINC00239-201ENST00000556973 E7ENX8 843 aa10.28□□□□□ -0.76
LINC00239-201ENST00000556973 E7EQ34 232 aa10.28□□□□□ -0.76
LINC00239-201ENST00000556973 CPNE3O75131 537 aaKnown RBP10.28□□□□□ -0.76
LINC00239-201ENST00000556973 CCNDBP1O95273 360 aa10.28□□□□□ -0.76
LINC00239-201ENST00000556973 TIAF1O95411 115 aa10.28□□□□□ -0.76
LINC00239-201ENST00000556973 KLK3P07288 261 aaPredicted RBP10.28□□□□□ -0.76
LINC00239-201ENST00000556973 ENO2P09104 434 aaPredicted RBP10.28□□□□□ -0.76
LINC00239-201ENST00000556973 HBQ1P09105 142 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms