RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ACTR5Q9H9F9 607 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 FBXO6Q9NRD1 293 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 ARGLU1Q9NWB6 273 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 TUBD1Q9UJT1 453 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 KLHL20Q9Y2M5 609 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 SNX24Q9Y343 169 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 KCNMB2Q9Y691 235 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 MAD1L1Q9Y6D9 718 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 A0A1W2PPV9 198 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 MAGEB16A2A368 324 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 CDC14CA4D256 554 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 ARHGEF33A8MVX0 844 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 ISM1B1AKI9 464 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 E7EQ34 232 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 MEN1O00255 615 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 ZNF749O43361 778 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 PSMB5P28074 263 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 CCR10P46092 362 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 MPP1Q00013 466 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 DHX9Q08211 1270 aaKnown RBP9.94□□□□□ -0.82
SHMT2-224ENST00000556737 CALCOCO2Q13137 446 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 CTBP1Q13363 440 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 CRYMQ14894 314 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 LONRF1Q17RB8 773 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 PTCHD3Q3KNS1 767 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 MSS51Q4VC12 460 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 ACSBG2Q5FVE4 666 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 FAM69BQ5VUD6 431 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 FCRL6Q6DN72 434 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 ZNF605Q86T29 641 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 SYVN1Q86TM6 617 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 HOOK3Q86VS8 718 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 ENDOVQ8N8Q3 282 aaKnown RBP9.94□□□□□ -0.82
SHMT2-224ENST00000556737 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.94□□□□□ -0.82
SHMT2-224ENST00000556737 HMGCLL1Q8TB92 370 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 ADAMTS17Q8TE56 1095 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 APOBEC4Q8WW27 367 aaKnown RBP9.94□□□□□ -0.82
SHMT2-224ENST00000556737 MR1Q95460 341 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 RAD51AP1Q96B01 352 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 CLIP3Q96DZ5 547 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 RAB11FIP5Q9BXF6 653 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 GPR87Q9BY21 358 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 PARD6BQ9BYG5 372 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 SLC25A18Q9H1K4 315 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 FAM114A2Q9NRY5 505 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 C20orf96Q9NUD7 363 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-224ENST00000556737 SPATA7Q9P0W8 599 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 DMGDHQ9UI17 866 aaKnown RBP9.94□□□□□ -0.82
SHMT2-224ENST00000556737 POLHQ9Y253 713 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 FAM169AQ9Y6X4 670 aa9.94□□□□□ -0.82
SHMT2-224ENST00000556737 MYO1CO00159 1063 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 PFDN6O15212 129 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 TP73O15350 636 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 NRP2O60462 931 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 PSIP1O75475 530 aaKnown RBP9.93□□□□□ -0.82
SHMT2-224ENST00000556737 ERLIN1O75477 346 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 OR2B3O76000 313 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 TUBBP07437 444 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 RAB40ALP0C0E4 278 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 SFTPCP11686 197 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 PGAM1P18669 254 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 PMS2P54278 862 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 TIAL1Q01085 375 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHMT2-224ENST00000556737 NCF4Q15080 339 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 CYP2A13Q16696 494 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 HSP90AA5PQ58FG0 334 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 CPZQ66K79 652 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 KCNMB4Q86W47 210 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 IGDCC3Q8IVU1 814 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 LMNTD2Q8IXW0 634 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 GSPT2Q8IYD1 628 aaKnown RBP9.93□□□□□ -0.82
SHMT2-224ENST00000556737 GSDMBQ8TAX9 411 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 CD200R1Q8TD46 325 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 SKA2Q8WVK7 121 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-224ENST00000556737 KCNJ9Q92806 393 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 SLC22A18Q96BI1 424 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 SNF8Q96H20 258 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 ZNF285Q96NJ3 590 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 GBP5Q96PP8 586 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 ERP44Q9BS26 406 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 FAM167BQ9BTA0 163 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 FAM117AQ9C073 453 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 SPRTNQ9H040 489 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-224ENST00000556737 ENAMQ9NRM1 1142 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 SLC17A6Q9P2U8 582 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 SERTAD3Q9UJW9 196 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 FBXO5Q9UKT4 447 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 FARSAQ9Y285 508 aaKnown RBP9.93□□□□□ -0.82
SHMT2-224ENST00000556737 VPS9D1Q9Y2B5 631 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 KLK4Q9Y5K2 254 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 NUP210LQ5VU65 1888 aa9.93□□□□□ -0.82
SHMT2-224ENST00000556737 PCM1Q15154 2024 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 SPTA1P02549 2419 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 E5RI56 91 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 ZSCAN9O15535 394 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 MAP3K7O43318 606 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 CTSVO60911 334 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 CNOT3O75175 753 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 FKBP9O95302 570 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms