RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 FAM129CQ86XR2 697 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 DCP2Q8IU60 420 aaKnown RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 CEP97Q8IW35 865 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 DENND6AQ8IWF6 608 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 SCN4BQ8IWT1 228 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 DDIASQ8IXT1 998 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 KBTBD2Q8IY47 623 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 LSMEM2Q8N112 164 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 DHRSXQ8N5I4 330 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 C12orf76Q8N812 135 aaPredicted RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 TRPV3Q8NET8 790 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 SPATA22Q8NHS9 363 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 FAM81AQ8TBF8 368 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 MAPK15Q8TD08 544 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 STARD8Q92502 1023 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 LPGAT1Q92604 370 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 HDAC10Q969S8 669 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 VPS33AQ96AX1 596 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 TADA1Q96BN2 335 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 SLC39A13Q96H72 371 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 PDLIM5Q96HC4 596 aaKnown RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 PPP3R2Q96LZ3 170 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 RPRD1AQ96P16 312 aaPredicted RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 APOL2Q9BQE5 337 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 BCL7BQ9BQE9 202 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 HERC2P3Q9BVR0 1158 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 CINPQ9BW66 212 aaPredicted RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 SHCBP1LQ9BZQ2 653 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 ZCWPW1Q9H0M4 648 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 PLGRKTQ9HBL7 147 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 MID1IP1Q9NPA3 183 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 NT5MQ9NPB1 228 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6□□□□□ -1.45
CPSF2-205ENST00000556622 TBCCD1Q9NVR7 557 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 NLE1Q9NVX2 485 aaPredicted RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 PIH1D1Q9NWS0 290 aaKnown RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 IL37Q9NZH6 218 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 MARCH2Q9P0N8 246 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 ABCD2Q9UBJ2 740 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 CD300AQ9UGN4 299 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 DPP7Q9UHL4 492 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 TRMT6Q9UJA5 497 aaKnown RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 ANAPC2Q9UJX6 822 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 ITGB1BP2Q9UKP3 347 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 MAFFQ9ULX9 164 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 FAF1Q9UNN5 650 aaPredicted RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 EIF3LQ9Y262 564 aaKnown RBP6□□□□□ -1.45
CPSF2-205ENST00000556622 PKP3Q9Y446 797 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 MFHAS1Q9Y4C4 1052 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 AP1M2Q9Y6Q5 423 aa6□□□□□ -1.45
CPSF2-205ENST00000556622 TSC2P49815 1807 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 TRANK1O15050 2925 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ILVBLA1L0T0 632 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 FAM234BA2RU67 622 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 FAM221BA6H8Z2 402 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 F5H423 210 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 H3BNH8 94 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 EIF3FO00303 357 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 SLC28A1O00337 649 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 RAD51BO15315 384 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 TEX28O15482 410 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 PRODHO43272 600 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 RGS14O43566 566 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 MRPS14O60783 128 aaKnown RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 PRAMEF11O60813 436 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 PFDN1O60925 122 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 TOP3BO95985 862 aaKnown RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 GLUD1P00367 558 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 OTCP00480 354 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 HPRP00739 348 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 LDLRP01130 860 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ASLP04424 464 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 IL6P05231 212 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ASGR2P07307 311 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ENO2P09104 434 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 SBK3P0C264 359 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 HGFP14210 728 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 CD1DP15813 335 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ZNF26P17031 533 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ZNF37AP17032 561 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ZNF7P17097 686 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 PFKLP17858 780 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 RPL17P18621 184 aaKnown RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 CDH2P19022 906 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 MYF6P23409 242 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 PSMA3P25788 255 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 GABRB3P28472 473 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 HMOX2P30519 316 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ATP5C1P36542 298 aaKnown RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 BRCC3P46736 316 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ARPP19P56211 112 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 CSNK2BP67870 215 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 CREMQ03060 361 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 LRRC74AQ0VAA2 488 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 ZNF177Q13360 481 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-205ENST00000556622 IL18R1Q13478 541 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 NFYCQ13952 458 aa5.99□□□□□ -1.45
CPSF2-205ENST00000556622 KCNC3Q14003 757 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms