RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SGK1O00141 431 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 CYB561D2O14569 222 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 XPO1O14980 1071 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 POLR3GO15318 223 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 LRCH4O75427 683 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 RPP40O75818 363 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 SEC14L2O76054 403 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 UNC5CO95185 931 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 TRUB2O95900 331 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 PGK1P00558 417 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 CALCAP01258 141 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 VIPP01282 170 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 APOC2P02655 101 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 RHOP08100 348 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 NUDT17P0C025 328 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ODC1P11926 461 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 KDELR1P24390 212 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 CTGFP29279 349 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 STIP1P31948 543 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 GJC1P36383 396 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ARL1P40616 181 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 PTPN9P43378 593 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 CPA2P48052 419 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 RPL34P49207 117 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 ZNF81P51508 661 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 AIF1P55008 147 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 PLTPP55058 493 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 CDH15P55291 814 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 TAS2R40P59535 323 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 LILRA4P59901 499 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 NHLH1Q02575 133 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 KRT17Q04695 432 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 MGAT3Q09327 533 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 IFFO1Q0D2I5 559 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 TMEM115Q12893 351 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 LMAN2Q12907 356 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 GRIK3Q13003 919 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 BYSLQ13895 437 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 ARHGEF7Q14155 803 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 FAM153CQ494X1 144 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 SLC39A12Q504Y0 691 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 C2CD6Q53TS8 623 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 HSP90AA5PQ58FG0 334 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ZNF766Q5HY98 468 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 RBM20Q5T481 1227 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 CYP4A22Q5TCH4 519 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 AGBL2Q5U5Z8 902 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 DENND2CQ68D51 928 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 MFSD7Q6UXD7 560 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 BZW1Q7L1Q6 419 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 DSG4Q86SJ6 1040 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ACOT1Q86TX2 421 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 PSTKQ8IV42 348 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 SIX6OS1Q8N1H7 587 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 THEM5Q8N1Q8 247 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 FAM109AQ8N4B1 249 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 IL17RCQ8NAC3 791 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 CMASQ8NFW8 434 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 HASPINQ8TF76 798 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 RNF139Q8WU17 664 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 SLC35F5Q8WV83 523 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 UBLCP1Q8WVY7 318 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 RXFP2Q8WXD0 754 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ART4Q93070 314 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ZIM3Q96PE6 472 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 TIMP4Q99727 224 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 FERMT1Q9BQL6 677 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 CCDC77Q9BR77 488 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 MRPL45Q9BRJ2 306 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 TRIM51Q9BSJ1 452 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 MLPHQ9BV36 600 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 FTHL17Q9BXU8 183 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 FRMD8Q9BZ67 464 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 ACPTQ9BZG2 426 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ROPN1BQ9BZX4 212 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 TRIM31Q9BZY9 425 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 TRIM7Q9C029 511 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 MS4A7Q9GZW8 240 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 ROPN1Q9HAT0 212 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 PCDH9Q9HC56 1237 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 CD93Q9NPY3 652 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 KLC4Q9NSK0 619 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 SPATS2LQ9NUQ6 558 aaKnown RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 ASB6Q9NWX5 421 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ZSCAN32Q9NX65 697 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 C6orf203Q9P0P8 240 aaPredicted RBP5.07□□□□□ -1.6
SRP54-211ENST00000556445 VPS18Q9P253 973 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 TUBGCP4Q9UGJ1 667 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 FAM153AQ9UHL3 310 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ANAPC2Q9UJX6 822 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 CDH9Q9ULB4 789 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 STAP1Q9ULZ2 295 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 ZNF148Q9UQR1 794 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 TBC1D30Q9Y2I9 924 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 HES2Q9Y543 173 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 LOC102723971A0A1B0GUV8 181 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 FAM237BA0A1B0GVD1 139 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms