RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SIK2Q9H0K1 926 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF385DQ9H6B1 395 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 WDR26Q9H7D7 661 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CAAP1Q9H8G2 361 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CERS4Q9HA82 394 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 MEAF6Q9HAF1 191 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CHST12Q9NRB3 414 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CHRAC1Q9NRG0 131 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 RGS18Q9NS28 235 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 RBM22Q9NW64 420 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 PKD2L2Q9NZM6 624 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CCDC167Q9P0B6 97 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 RSL24D1Q9UHA3 163 aaKnown RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 ZDHHC2Q9UIJ5 367 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SLC8A2Q9UPR5 921 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 IPPQ9Y573 584 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NME7Q9Y5B8 376 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SNX13Q9Y5W8 968 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 COMMD10Q9Y6G5 202 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NLRC5Q86WI3 1866 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 MCM3APO60318 1980 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TRIP11Q15643 1979 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CEP250Q9BV73 2442 aa4.34□□□□□ -1.72
ATXN3-241ENST00000556374 DNAH14Q0VDD8 3507 aa4.34□□□□□ -1.72
ATXN3-241ENST00000556374 TRIOO75962 3097 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 EVPLQ92817 2033 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 A0A1W2PR48 441 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 KANSL1LA0AUZ9 987 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 DHRS12A0PJE2 317 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 MBLAC1A4D2B0 266 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 AQP12BA6NM10 295 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 YJEFN3A6XGL0 299 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SYCE1LA8MT33 242 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 A8MT66 165 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SUPT3HB4E1H0 165 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 RNASET2O00584 256 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 GABRDO14764 452 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 IRAK2O43187 625 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ADCY6O43306 1168 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SUPT3HO75486 399 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SUPT7LO94864 414 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SORBS2O94875 1100 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PAPSS2O95340 614 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 H6PDO95479 791 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 LY86O95711 162 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 MOCS2O96007 188 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PGK1P00558 417 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 GASTP01350 101 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SLC4A1P02730 911 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 S100BP04271 92 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 HLA-DQB2P05538 268 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 GPIP06744 558 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 CCDC166P0CW27 439 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 GFAPP14136 432 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 IDO1P14902 403 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TFEBP19484 476 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 BMP5P22003 454 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 NR4A1P22736 598 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 FASP25445 335 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 RPL9P32969 192 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ARL1P40616 181 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SLC26A3P40879 764 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ACADVLP49748 655 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SERPINH1P50454 418 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SLC7A2P52569 658 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 NME5P56597 212 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TAS2R39P59534 338 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ATP6V0D1P61421 351 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PITX1P78337 314 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 RHDQ02161 417 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PLOD1Q02809 727 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 YWHAHQ04917 246 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SULT2A1Q06520 285 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 GALNT1Q10472 559 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 MTA1Q13330 715 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 CTBP1Q13363 440 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 OLIG2Q13516 323 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 CEACAM7Q14002 265 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TRIM25Q14258 630 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF235Q14590 738 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 LPIN1Q14693 890 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 NRF1Q16656 503 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 KCTD21Q4G0X4 260 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 XKR4Q5GH76 650 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 MTX3Q5HYI7 312 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 RAB41Q5JT25 222 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 MARCH8Q5T0T0 291 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 FAM182AQ5T1J6 154 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TMTC4Q5T4D3 741 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF618Q5T7W0 954 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TSTD2Q5T7W7 516 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 HECTD2Q5U5R9 776 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 MARC1Q5VT66 337 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SYPL2Q5VXT5 272 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TMEM198Q66K66 360 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TAF2Q6P1X5 1199 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 IYDQ6PHW0 289 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 UNQ6494/PRO21346Q6UXR6 183 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms