RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 KMT5CQ86Y97 462 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 ADGRF3Q8IZF5 1079 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 CYP4X1Q8N118 509 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 CACTIN-AS1Q8N1I8 211 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 MZB1Q8WU39 189 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 ZNF480Q8WV37 535 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 JPH3Q8WXH2 748 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 ADAMTS14Q8WXS8 1223 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 RSC1A1Q92681 617 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 DLG3Q92796 817 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 EXT2Q93063 718 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 PTERQ96BW5 349 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 IL17FQ96PD4 163 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 TGM7Q96PF1 710 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 MIPEPQ99797 713 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 HAUS8Q9BT25 410 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 UNKQ9C0B0 810 aaKnown RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 CCDC177Q9NQR7 707 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 C1GALT1Q9NS00 363 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 TOR4AQ9NXH8 423 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 ACTR10Q9NZ32 417 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 WWOXQ9NZC7 414 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 STOX2Q9P2F5 926 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 CIDEBQ9UHD4 219 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 POMT2Q9UKY4 750 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 ATXN7L1Q9ULK2 861 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 CLCA2Q9UQC9 943 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 TNPO3Q9Y5L0 923 aaKnown RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 ACTL7BQ9Y614 415 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 HEATR5BQ9P2D3 2071 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 WDFY4Q6ZS81 3184 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 MN1Q10571 1320 aaPredicted RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 SEC16AO15027 2179 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 E7ENX8 843 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 BTN3A3O00478 584 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 SNRNP200O75643 2136 aaKnown RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 STK16O75716 305 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 C9P02748 559 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 HRH2P25021 359 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 IMPA1P29218 277 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 PRDX3P30048 256 aaKnown RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 CMPK1P30085 196 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CCKBRP32239 447 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CSTF2P33240 577 aaKnown RBP eCLIP7.38□□□□□ -1.23
TDP1-214ENST00000556063 PIK3CGP48736 1102 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 ALDH18A1P54886 795 aaKnown RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 INSM1Q01101 510 aaPredicted RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 TAP2Q03519 686 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 ASPHQ12797 758 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 DLG1Q12959 904 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 EIF3IQ13347 325 aaKnown RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 NAE1Q13564 534 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 OR4D1Q15615 310 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 PPP1R3AQ16821 1122 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 SLC5A12Q1EHB4 618 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 ISXQ2M1V0 245 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CCSMST1Q4G0I0 132 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 TECRLQ5HYJ1 363 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 SNAP47Q5SQN1 464 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 TMTC4Q5T4D3 741 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 PHF19Q5T6S3 580 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 N4BP2L1Q5TBK1 243 aaPredicted RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 HES3Q5TGS1 186 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CACHD1Q5VU97 1274 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 PRAMEF13Q5VWM6 474 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CDCP2Q5VXM1 449 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 METTL2BQ6P1Q9 378 aaKnown RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 CYB5D1Q6P9G0 228 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 SPESP1Q6UW49 350 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 DGLUCYQ7Z3D6 616 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 PRSS42Q7Z5A4 293 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 SLC22A9Q8IVM8 553 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 C4orf33Q8N1A6 199 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 PLD6Q8N2A8 252 aaKnown RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 FBXO39Q8N4B4 442 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CCDC63Q8NA47 563 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 PDPRQ8NCN5 879 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 AGBL5Q8NDL9 886 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 RDH11Q8TC12 318 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 DENND1AQ8TEH3 1009 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 SREK1Q8WXA9 508 aaKnown RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 RHBDF1Q96CC6 855 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CCDC126Q96EE4 140 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 MED8Q96G25 268 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 APOPT1Q96IL0 206 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 GPR78Q96P69 363 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 ATOH8Q96SQ7 321 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CMKLR1Q99788 373 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 NUDT22Q9BRQ3 303 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 MENTQ9BUN1 341 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CAPS2Q9BXY5 557 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 ATG10Q9H0Y0 220 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 SSU72Q9NP77 194 aaKnown RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 MKS1Q9NXB0 559 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 OGFRQ9NZT2 677 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 TMEM216Q9P0N5 145 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 CPSF2Q9P2I0 782 aaKnown RBP7.38□□□□□ -1.23
TDP1-214ENST00000556063 PDP2Q9P2J9 529 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 XPR1Q9UBH6 696 aa7.38□□□□□ -1.23
TDP1-214ENST00000556063 KLHL3Q9UH77 587 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms