RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SEMA3GQ9NS98 782 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 TREX1Q9NSU2 369 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 CATSPERZQ9NTU4 200 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 P4HTMQ9NXG6 502 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 KLHL42Q9P2K6 505 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 DHCR7Q9UBM7 475 aaKnown RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 SLC2A6Q9UGQ3 507 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 GNPTGQ9UJJ9 305 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 B3GNT3Q9Y2A9 372 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 CAPN6Q9Y6Q1 641 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 USP9YO00507 2555 aaPredicted RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 POLEQ07864 2286 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 CNTRLQ7Z7A1 2325 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 SPTBN1Q01082 2364 aaKnown RBP7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 ICE1Q9Y2F5 2266 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 A0A1B0GX78 115 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 BLACEA4D250 179 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 VSTM2BA6NLU5 285 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 TCP11X1B4DZS4 312 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 DSCR3O14972 297 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 HCRTR1O43613 425 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 NDUFS3O75489 264 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 AGFG2O95081 481 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 MATN4O95460 622 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 CBX6O95503 412 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 C1orf105O95561 183 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 TPSB2P20231 275 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 MAGP20916 626 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 ALAS2P22557 587 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 GNLYP22749 145 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 ATP5DP30049 168 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 OTX2P32243 289 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 RPL22P35268 128 aaKnown RBP7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 GRIA3P42263 894 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 CARSP49589 748 aaKnown RBP7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 ARHGAP19Q14CB8 494 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 TPSAB1Q15661 275 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 CYP2A13Q16696 494 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 PLEKHN1Q494U1 663 aaPredicted RBP7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 RNF187Q5TA31 235 aaPredicted RBP7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 PTRHD1Q6GMV3 140 aaKnown RBP7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 MRNIPQ6NTE8 343 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 LRRC8BQ6P9F7 803 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 OTOAQ7RTW8 1153 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 PPP1R32Q7Z5V6 425 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 VRK3Q8IV63 474 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 TTC29Q8NA56 475 aaPredicted RBP7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 C1orf54Q8WWF1 131 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 ATG4AQ8WYN0 398 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 MVB12AQ96EY5 273 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 LMF1Q96S06 567 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 NRTNQ99748 197 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 KLHL25Q9H0H3 589 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 SLC22A11Q9NSA0 550 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 CUTCQ9NTM9 273 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 PIH1D1Q9NWS0 290 aaKnown RBP7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 UTP6Q9NYH9 597 aaKnown RBP7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 SPATA7Q9P0W8 599 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 CDC14AQ9UNH5 594 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 VPS9D1Q9Y2B5 631 aa7.47□□□□□ -1.21
PTCSC3-201ENST00000556013 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 IGLV3-12A0A075B6K2 115 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 A6NL46 340 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 ZNF839A8K0R7 811 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 IQCF5A8MTL0 148 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 TXNDC9O14530 226 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 CNOT3O75175 753 aaKnown RBP7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 ESR1P03372 595 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 UMODP07911 640 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 MLNP12872 115 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 ETS1P14921 441 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 PAMP19021 973 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 OGNP20774 298 aaKnown RBP7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 FDXRP22570 491 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 MAGEA6P43360 314 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 GBX1Q14549 363 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 SEMA3AQ14563 771 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 SLC9A5Q14940 896 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 SIX1Q15475 284 aaPredicted RBP7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 NKG7Q16617 165 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 TYSND1Q2T9J0 566 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 MUM1Q2TAK8 710 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 ANKRD20A4Q4UJ75 823 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 C4orf17Q53FE4 359 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 C1orf189Q5VU69 101 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 GARNL3Q5VVW2 1013 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 PRAMEF13Q5VWM6 474 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 FCRL6Q6DN72 434 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 RPUSD3Q6P087 351 aaKnown RBP7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 FBXO42Q6P3S6 717 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 NAPRTQ6XQN6 538 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 TTLL10Q6ZVT0 673 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 NEK10Q6ZWH5 1172 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 TRIM73Q86UV7 250 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 GAS2L3Q86XJ1 694 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 LMNTD2Q8IXW0 634 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 FBXO15Q8NCQ5 510 aaPredicted RBP7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 TRIM58Q8NG06 486 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 OR2A1Q8NGT9 310 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms