RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SPARTQ8N0X7 666 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CBARPQ8N350 705 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 SLC43A3Q8NBI5 491 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ZNF461Q8TAF7 563 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 BCL7CQ8WUZ0 217 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 NUDT8Q8WV74 236 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 SELENOMQ8WWX9 145 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 USP7Q93009 1102 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 ACDQ96AP0 544 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 MTFMTQ96DP5 389 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 PYURFQ96I23 114 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 REXO5Q96IC2 774 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 PLEKHA8Q96JA3 519 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 COX4I2Q96KJ9 171 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 HIST1H2AHQ96KK5 128 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 MAGEB10Q96LZ2 347 aaPredicted RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 FAM210AQ96ND0 272 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 NODALQ96S42 347 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 HIST1H2AJQ99878 128 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 H2AFJQ9BTM1 129 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 SLC32A1Q9H598 525 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 IKZF5Q9H5V7 419 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CARS2Q9HA77 564 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 SLC25A37Q9NYZ2 338 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 KLHL42Q9P2K6 505 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 LSM7Q9UK45 103 aaKnown RBP6.83□□□□□ -1.32
TDP1-213ENST00000555880 TMED5Q9Y3A6 229 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 NEUROG3Q9Y4Z2 214 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 YIPF1Q9Y548 306 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 TRIM17Q9Y577 477 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PCDHB14Q9Y5E9 798 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PCDHGA8Q9Y5G5 932 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 PRSS21Q9Y6M0 314 aa6.83□□□□□ -1.32
TDP1-213ENST00000555880 CFAP99D6REC4 459 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 TMX2-CTNND1H3BSU7 103 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 K7ERQ8 282 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 RFXANKO14593 260 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 SCAMP3O14828 347 aaKnown RBP6.82□□□□□ -1.32
TDP1-213ENST00000555880 WNT9AO14904 365 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 MAGEB3O15480 346 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 UGT2B11O75310 529 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CCNDBP1O95273 360 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 SEC24AO95486 1093 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 ZBTB11O95625 1053 aaPredicted RBP6.82□□□□□ -1.32
TDP1-213ENST00000555880 ZNF682O95780 498 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 PDYNP01213 254 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 C8GP07360 202 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CCDC159P0C7I6 412 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 OR56A5P0C7T3 313 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CD247P20963 164 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 IGFBP5P24593 272 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 DCTP40126 519 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 HNMTP50135 292 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 MAPK10P53779 464 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 PLA2G16P53816 162 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 EPHB3P54753 998 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CAP1Q01518 475 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 ABHD18Q0P651 414 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 NKG7Q16617 165 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 MEP1AQ16819 746 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 GGTA1PQ4G0N0 100 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 LRIF1Q5T3J3 769 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 ZNF691Q5VV52 312 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CRTC3Q6UUV7 619 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 SUSD1Q6UWL2 747 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 MSANTD1Q6ZTZ1 278 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 USP45Q70EL2 814 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 UBE2R2Q712K3 238 aaPredicted RBP6.82□□□□□ -1.32
TDP1-213ENST00000555880 DET1Q7L5Y6 550 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CALHM3Q86XJ0 350 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
TDP1-213ENST00000555880 PHACTR4Q8IZ21 702 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 ELMOD1Q8N336 334 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CSGALNACT1Q8TDX6 532 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 ZNF296Q8WUU4 475 aaPredicted RBP6.82□□□□□ -1.32
TDP1-213ENST00000555880 SNRNP27Q8WVK2 155 aaKnown RBP6.82□□□□□ -1.32
TDP1-213ENST00000555880 NELL1Q92832 810 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 BHMTQ93088 406 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 WBP2Q969T9 261 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 TESCQ96BS2 214 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CCDC97Q96F63 343 aaPredicted RBP6.82□□□□□ -1.32
TDP1-213ENST00000555880 CMTM7Q96FZ5 175 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 COPS8Q99627 209 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CPPED1Q9BRF8 314 aaPredicted RBP6.82□□□□□ -1.32
TDP1-213ENST00000555880 DGCR6LQ9BY27 220 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 ACPTQ9BZG2 426 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 AMBRA1Q9C0C7 1298 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 CCDC90BQ9GZT6 254 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 ZDHHC3Q9NYG2 299 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 MAN2B2Q9Y2E5 1009 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 OR51B4Q9Y5P0 310 aa6.82□□□□□ -1.32
TDP1-213ENST00000555880 TRBV5-3A0A0A0MS03 114 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 PTGES3LE9PB15 166 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SLC1A7O00341 560 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SLC16A6O15403 523 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SMAD6O43541 496 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 FOXD2O60548 495 aaPredicted RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 ABLIM3O94929 683 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 OCM2P0CE71 109 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 OCMP0CE72 109 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms