RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 TBR1Q16650 682 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 FAM69BQ5VUD6 431 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 PAQR3Q6TCH7 311 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 SUSD1Q6UWL2 747 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 ZDHHC24Q6UX98 284 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 ZNF517Q6ZMY9 492 aaPredicted RBP13.16□□□□□ -0.3
SNX6-203ENST00000555416 NEK10Q6ZWH5 1172 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 MAATS1Q7Z4T9 603 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 BPHLQ86WA6 291 aaPredicted RBP13.16□□□□□ -0.3
SNX6-203ENST00000555416 ZBED8Q8IZ13 594 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 PPFIBP2Q8ND30 876 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 OR2A1Q8NGT9 310 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 OR9A1PQ8NGU1 263 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 OR8K5Q8NH50 307 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 HMGCLL1Q8TB92 370 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 EEF1AKMT1Q8WVE0 214 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 STARD8Q92502 1023 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 SLC39A7Q92504 469 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 KIAA1143Q96AT1 154 aaPredicted RBP13.16□□□□□ -0.3
SNX6-203ENST00000555416 FOPNLQ96NB1 174 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 OLFM1Q99784 485 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 MIPEPQ99797 713 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 ADAMTS6Q9UKP5 1117 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 PADI1Q9ULC6 663 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 CFAP46Q8IYW2 2715 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 FER1L5A0AVI2 2057 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 ESYT3A0FGR9 886 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 CXorf49A8MYA2 514 aaPredicted RBP13.15□□□□□ -0.3
SNX6-203ENST00000555416 ZNF749O43361 778 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 KDM1AO60341 852 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 CTSVO60911 334 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 CPNE3O75131 537 aaKnown RBP13.15□□□□□ -0.3
SNX6-203ENST00000555416 VPS26AO75436 327 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 KATNA1O75449 491 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 TSPAN12O95859 305 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 SLC16A8O95907 504 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 CAPN1P07384 714 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 MPC1LP0DKB6 136 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 TCN2P20062 427 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 CYP2A7P20853 494 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 SSTR1P30872 391 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 ITGA1P56199 1179 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 NFKB2Q00653 900 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 DNASE1L3Q13609 305 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 FRG1Q14331 258 aaKnown RBP13.15□□□□□ -0.3
SNX6-203ENST00000555416 SF1Q15637 639 aaKnown RBP13.15□□□□□ -0.3
SNX6-203ENST00000555416 PTCHD3Q3KNS1 767 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 TTLL9Q3SXZ7 439 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 TAF1BQ53T94 588 aaPredicted RBP13.15□□□□□ -0.3
SNX6-203ENST00000555416 C16orf46Q6P387 395 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 CYB5D1Q6P9G0 228 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 FIGLAQ6QHK4 219 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 KIAA0408Q6ZU52 694 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 GALNT7Q86SF2 657 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 TMEM151BQ8IW70 566 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 GPATCH11Q8N954 259 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 OR2L3Q8NG85 312 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 ZNF480Q8WV37 535 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 ZNF592Q92610 1267 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 ACAT2Q9BWD1 397 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 CHRNA10Q9GZZ6 450 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 SYNPO2LQ9H987 977 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 SLC6A20Q9NP91 592 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 SAYSD1Q9NPB0 183 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 PCMTD2Q9NV79 361 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 SPATA7Q9P0W8 599 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 TRMT6Q9UJA5 497 aaKnown RBP13.15□□□□□ -0.3
SNX6-203ENST00000555416 SERTAD3Q9UJW9 196 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 PCDHB3Q9Y5E6 796 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 COMMD10Q9Y6G5 202 aa13.15□□□□□ -0.3
SNX6-203ENST00000555416 BOD1L1Q8NFC6 3051 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 SEC16AO15027 2179 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 IGKV1-8A0A0C4DH67 115 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 ZNF891A8MT65 544 aaPredicted RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 MEN1O00255 615 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 C1QAP02745 245 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 CATP04040 527 aaKnown RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 FAM87AP0C7U9 286 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 CCNYL3P0C7X3 344 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 CBSLP0DN79 551 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 ENO3P13929 434 aaPredicted RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 FDXRP22570 491 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 CBSP35520 551 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 PLTPP55058 493 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 GPX6P59796 221 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 MGAT5Q09328 741 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 CDC20Q12834 499 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 CALCOCO2Q13137 446 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 HECTD2Q5U5R9 776 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 ZNF385CQ66K41 422 aaPredicted RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 TMEM207Q6UWW9 146 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 MBOAT1Q6ZNC8 495 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 MCATQ8IVS2 390 aaKnown RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 LRRC56Q8IYG6 542 aaPredicted RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 DSELQ8IZU8 1212 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 ZNF655Q8N720 491 aaPredicted RBP13.14□□□□□ -0.31
SNX6-203ENST00000555416 ZSCAN1Q8NBB4 408 aa13.14□□□□□ -0.31
SNX6-203ENST00000555416 FBXO15Q8NCQ5 510 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms