RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 RAB44Q7Z6P3 723 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-218ENST00000555213 PIGWQ7Z7B1 504 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 TBC1D1Q86TI0 1168 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-218ENST00000555213 AMIGO1Q86WK6 493 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 C10orf107Q8IVU9 208 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 OR4D9Q8NGE8 314 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 NCSTNQ92542 709 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 MRPL57Q9BQC6 102 aaKnown RBP10.58□□□□□ -0.72
SHMT2-218ENST00000555213 TRIM54Q9BYV2 358 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 RABEP2Q9H5N1 569 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 MANSC1Q9H8J5 431 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 SLCO1B3Q9NPD5 702 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 OXSMQ9NWU1 459 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 OR6C2Q9NZP2 312 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 AKAP7Q9P0M2 348 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-218ENST00000555213 SPATA7Q9P0W8 599 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 CPSF2Q9P2I0 782 aaKnown RBP10.58□□□□□ -0.72
SHMT2-218ENST00000555213 LNPEPQ9UIQ6 1025 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 PCNX2A6NKB5 2137 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 PRAMEF33A0A0G2JMD5 474 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 GSAPA4D1B5 854 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 OR6C74A6NCV1 312 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 OR5K3A6NET4 321 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ARHGEF33A8MVX0 844 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 C2orf74A8MZ97 194 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 TK2O00142 265 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 CDC7O00311 574 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 SLC16A5O15375 505 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ITM2AO43736 263 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 SNNO75324 88 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 CSO75390 466 aaKnown RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 PSIP1O75475 530 aaKnown RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ENO2P09104 434 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 HIST1H2AGP0C0S8 130 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 HIST1H2ADP20671 130 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 PKLRP30613 574 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 CSF2RBP32927 897 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 HSD17B2P37059 387 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 INHBCP55103 352 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 TSNAXIP1Q2TAA8 658 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 PHF19Q5T6S3 580 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 CDCP2Q5VXM1 449 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 IRGCQ6NXR0 463 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ZYG11AQ6WRX3 759 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 USP53Q70EK8 1073 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 UBE2R2Q712K3 238 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ADAMTSL2Q86TH1 951 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 RASGRP3Q8IV61 690 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 NUDCD3Q8IVD9 361 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 CACTIN-AS1Q8N1I8 211 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 CHCHD4Q8N4Q1 142 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 DCBLD1Q8N8Z6 715 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 FBXO15Q8NCQ5 510 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 OR4E2Q8NGC2 313 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 MCOLN3Q8TDD5 553 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 JPH3Q8WXH2 748 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ASB11Q8WXH4 323 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 RSC1A1Q92681 617 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 KIAA1191Q96A73 305 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 CHMP6Q96FZ7 201 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 HIST1H2AHQ96KK5 128 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 TSNARE1Q96NA8 513 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ATOH8Q96SQ7 321 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 CD180Q99467 661 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 HIST1H2AJQ99878 128 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 NUDT22Q9BRQ3 303 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 H2AFJQ9BTM1 129 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 DERL2Q9GZP9 239 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 RAB33BQ9H082 229 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 RDH14Q9HBH5 336 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 HRASLS2Q9NWW9 162 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ATXN7L1Q9ULK2 861 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ICKQ9UPZ9 632 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 ENTPD2Q9Y5L3 495 aa10.57□□□□□ -0.72
SHMT2-218ENST00000555213 MN1Q10571 1320 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-218ENST00000555213 DNAH14Q0VDD8 3507 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 MYO1CO00159 1063 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 BTN3A1O00481 513 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 CAPN5O15484 640 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-218ENST00000555213 MAP3K7O43318 606 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 EDF1O60869 148 aaKnown RBP10.56□□□□□ -0.72
SHMT2-218ENST00000555213 RASSF9O75901 435 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 ADRB1P08588 477 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 THRAP10827 490 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 TFEBP19484 476 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 CCKBRP32239 447 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 AP1S2P56377 157 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 ATP6V0D1P61421 351 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 BST1Q10588 318 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 EIF3IQ13347 325 aaKnown RBP10.56□□□□□ -0.72
SHMT2-218ENST00000555213 TRA2AQ13595 282 aaKnown RBP eCLIP10.56□□□□□ -0.72
SHMT2-218ENST00000555213 ARHGAP19Q14CB8 494 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 CHI3L2Q15782 390 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 ISXQ2M1V0 245 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 FAM83EQ2M2I3 478 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 ANKS6Q68DC2 871 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 KLC3Q6P597 504 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 TMEM71Q6P5X7 295 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 FRA10AC1Q70Z53 315 aa10.56□□□□□ -0.72
SHMT2-218ENST00000555213 TMPRSS7Q7RTY8 843 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms