RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TBC1D10AQ9BXI6 508 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 C1QTNF3Q9BXJ4 246 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 TRIM54Q9BYV2 358 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 CD244Q9BZW8 370 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 SLC40A1Q9NP59 571 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 WASH6PQ9NQA3 447 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PSD3Q9NYI0 1048 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 CPNE7Q9UBL6 633 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 DCTN4Q9UJW0 460 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 ICKQ9UPZ9 632 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 SLC22A14Q9Y267 594 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PCDHGA5Q9Y5G8 931 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 FAM186AA6NE01 2351 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 SPTBP11277 2137 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 KLHL33A6NCF5 533 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PABPN1LA6NDY0 278 aaKnown RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 OR7A17O14581 309 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 KHNYNO15037 678 aaKnown RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 PRAMEF4O60810 478 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 H2AFYO75367 372 aaKnown RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 FAM107AO95990 144 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PSMB5P28074 263 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 AP1S2P56377 157 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 NAE1Q13564 534 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 GTF2H2Q13888 395 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PCBP2Q15366 365 aaKnown RBP eCLIP10.43□□□□□ -0.747e-11■■■■■ 50.5
TDP1-211ENST00000555178 RBBP7Q16576 425 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 SH2D4BQ5SQS7 431 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 VWA5B1Q5TIE3 1220 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PRAMEF9Q5VWM5 478 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 GTF2H2CQ6P1K8 395 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PRR23CQ6ZRP0 262 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 ASCL5Q7RTU5 278 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 ZNF438Q7Z4V0 828 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 SYVN1Q86TM6 617 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 LRRC56Q8IYG6 542 aaPredicted RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 EID2Q8N6I1 236 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 OR9A1PQ8NGU1 263 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 FBXL8Q96CD0 374 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 CNDP1Q96KN2 507 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 CCDC138Q96M89 665 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PPM1MQ96MI6 270 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 OR4K3Q96R72 315 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 NUSAP1Q9BXS6 441 aaKnown RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 TRIT1Q9H3H1 467 aaKnown RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 NOL11Q9H8H0 719 aaKnown RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 MID1IP1Q9NPA3 183 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 INTS7Q9NVH2 962 aaKnown RBP10.43□□□□□ -0.74
TDP1-211ENST00000555178 SPHK1Q9NYA1 384 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 PCNX2A6NKB5 2137 aa10.43□□□□□ -0.74
TDP1-211ENST00000555178 NDUFAB1O14561 156 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 SIGLEC6O43699 453 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 NRP2O60462 931 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 KCNJ13O60928 360 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 STK16O75716 305 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 ANXA6P08133 673 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 ZNF806P0C7X5 589 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 SERPINB3P29508 390 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 PEBP1P30086 187 aaKnown RBP10.42□□□□□ -0.74
TDP1-211ENST00000555178 ARRB1P49407 418 aaPredicted RBP10.42□□□□□ -0.74
TDP1-211ENST00000555178 TBPL1P62380 186 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 ASPHQ12797 758 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 TUBB8Q3ZCM7 444 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 TCHHL1Q5QJ38 904 aaPredicted RBP10.42□□□□□ -0.74
TDP1-211ENST00000555178 OGFOD3Q6PK18 319 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 C17orf82Q86X59 251 aaPredicted RBP10.42□□□□□ -0.74
TDP1-211ENST00000555178 GKN2Q86XP6 184 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 CRLF3Q8IUI8 442 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 SYTL1Q8IYJ3 562 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 FBXO15Q8NCQ5 510 aaPredicted RBP10.42□□□□□ -0.74
TDP1-211ENST00000555178 GPR156Q8NFN8 814 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 MAPK15Q8TD08 544 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 AGAP11Q8TF27 550 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 SEMA4GQ9NTN9 838 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.42□□□□□ -0.74
TDP1-211ENST00000555178 OPTCQ9UBM4 332 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 DOLKQ9UPQ8 538 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 PTGDR2Q9Y5Y4 395 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 A0A1W2PPV9 198 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 K7EPI3 171 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 BTN3A3O00478 584 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 KATNA1O75449 491 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 XRCC1P18887 633 aaPredicted RBP10.42□□□□□ -0.74
TDP1-211ENST00000555178 GGT5P36269 586 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 ARL1P40616 181 aaPredicted RBP10.42□□□□□ -0.74
TDP1-211ENST00000555178 LCP2Q13094 533 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 KIF26BQ2KJY2 2108 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 LETMD1Q6P1Q0 360 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 TBC1D21Q8IYX1 336 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 OR4E2Q8NGC2 313 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 CXorf40BQ96DE9 158 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 ACAT2Q9BWD1 397 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 IPPKQ9H8X2 491 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 KCNK13Q9HB14 408 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 TMCO1Q9UM00 188 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 RAP2CQ9Y3L5 183 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 RNF215Q9Y6U7 377 aa10.42□□□□□ -0.74
TDP1-211ENST00000555178 COL27A1Q8IZC6 1860 aaPredicted RBP10.42□□□□□ -0.74
TDP1-211ENST00000555178 A0A0G2JND7 137 aa10.41□□□□□ -0.74
TDP1-211ENST00000555178 SRRM3A6NNA2 597 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms