RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 GAGE6Q13070 117 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 MFAP5Q13361 173 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CUL3Q13618 768 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 SLMAPQ14BN4 828 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CA9Q16790 459 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF674Q2M3X9 581 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CTU2Q2VPK5 515 aaKnown RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 LRRC73Q5JTD7 316 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 SPDYCQ5MJ68 293 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 SHEQ5VZ18 495 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 PRR27Q6MZM9 219 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 MOXD1Q6UVY6 613 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 GSG1LQ6UXU4 331 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 GBP6Q6ZN66 633 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 MARK2Q7KZI7 788 aaKnown RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 HOOK3Q86VS8 718 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CDK20Q8IZL9 346 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 APCDD1Q8J025 514 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF843Q8N446 348 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 NHLRC2Q8NBF2 726 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 UXS1Q8NBZ7 420 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 SLC24A4Q8NFF2 622 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 OR13A1Q8NGR1 328 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 PIGBQ92521 554 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 ABHD8Q96I13 439 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 C17orf77Q96MU5 243 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF583Q96ND8 569 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 UHRF2Q96PU4 802 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CCDC3Q9BQI4 270 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 PSD2Q9BQI7 771 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 MINDY3Q9H8M7 445 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 APOBEC3GQ9HC16 384 aaKnown RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 OLFML3Q9NRN5 406 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 ARGLU1Q9NWB6 273 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 TAAR2Q9P1P5 351 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 MDFICQ9P1T7 246 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 WDR83OSQ9Y284 106 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 JRKLQ9Y4A0 524 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 RIPK3Q9Y572 518 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 A0A1W2PPW3 197 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 PI4K2BG5E9Z4 385 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 SYNGR3O43761 229 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 SELENOFO60613 162 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 FMO6PO60774 539 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 PRAF2O60831 178 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 NME6O75414 186 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 PDE9AO76083 593 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 VIMP08670 466 aaKnown RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 MNDAP41218 407 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 NKX2-1P43699 371 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 HOXA1P49639 335 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 GMPSP49915 693 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 MTCP1P56278 107 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 B3GALT5-AS1P59052 145 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 NONOQ15233 471 aaKnown RBP eCLIP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 TAZQ16635 292 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 UGT3A2Q3SY77 523 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 LACTB2Q53H82 288 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 ASPRV1Q53RT3 343 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 CCDC158Q5M9N0 1113 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 ELFN2Q5R3F8 820 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 IYDQ6PHW0 289 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 C19orf48Q6RUI8 117 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 ENPP7Q6UWV6 458 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 FOXP4Q8IVH2 680 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 MAML2Q8IZL2 1156 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 SYCP3Q8IZU3 236 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 CARNMT1Q8N4J0 409 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 BMPERQ8N8U9 685 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 CTCFLQ8NI51 663 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF473Q8WTR7 871 aaKnown RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 PROX1Q92786 737 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 ALG14Q96F25 216 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 FAM20AQ96MK3 541 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 MYADMQ96S97 322 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 PARK7Q99497 189 aaKnown RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 EPYCQ99645 322 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 EGFL8Q99944 293 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 RTP3Q9BQQ7 232 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 INPP5KQ9BT40 448 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 TRMT61BQ9BVS5 477 aaKnown RBP2.88□□□□□ -1.95
SCFD1-213ENST00000554776 PRRG4Q9BZD6 226 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 C2orf40Q9H1Z8 148 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 ARRDC1-AS1Q9H2J1 176 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 SNX25Q9H3E2 840 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 GKN1Q9NS71 199 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 CACNG4Q9UBN1 327 aa2.88□□□□□ -1.95
SCFD1-213ENST00000554776 HEG1Q9ULI3 1381 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 IGLV5-45A0A087WSX0 123 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 A0A087WV48 116 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 PSMD14O00487 310 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 PPIP5K2O43314 1243 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 FGF17O60258 216 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 GOSR1O95249 250 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 RLN1P04808 185 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 ATP1A1P05023 1023 aaKnown RBP2.87□□□□□ -1.95
SCFD1-213ENST00000554776 SAGP10523 405 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-213ENST00000554776 VDRP11473 427 aa2.87□□□□□ -1.95
SCFD1-213ENST00000554776 RGS7P49802 495 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms