RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 VRK1Q99986 396 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PELOQ9BRX2 385 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TTYH1Q9H313 450 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SMURF2Q9HAU4 748 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ITM2CQ9NQX7 267 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CCDC167Q9P0B6 97 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF232Q9UNY5 417 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FAM171A2A8MVW0 826 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OGTO15294 1046 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SLC16A8O95907 504 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RAB8AP61006 207 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NR0B2Q15466 257 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RNF151Q2KHN1 245 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SLC35G1Q2M3R5 365 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RETSATQ6NUM9 610 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ELMOD2Q8IZ81 293 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ITFG1Q8TB96 612 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TEX47Q8TBZ9 253 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SLC45A3Q96JT2 553 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 HCFC1R1Q9NWW0 138 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF223Q9UK11 482 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ST14Q9Y5Y6 855 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 COLEC10Q9Y6Z7 277 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ABCA5Q8WWZ7 1642 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 A0A1W2PR64 198 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 E9PI62 339 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TERTO14746 1132 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RGS14O43566 566 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NTSR2O95665 410 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CD4P01730 458 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MMP3P08254 477 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 LUMP51884 338 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FAM83EQ2M2I3 478 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RNFT1Q5M7Z0 435 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OGFOD2Q6N063 350 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 B3GNT6Q6ZMB0 384 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NUDT13Q86X67 352 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MRPL48Q96GC5 212 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GSTO2Q9H4Y5 243 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 UVRAGQ9P2Y5 699 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 AP2A2O94973 939 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GLDCP23378 1020 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OR3A3P47888 321 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OR3A2P47893 321 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CASP5P51878 434 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 EPHA4P54764 986 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ALCAMQ13740 583 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GARNL3Q5VVW2 1013 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TIGD3Q6B0B8 471 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 BHLHB9Q6PI77 547 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 KCNMB4Q86W47 210 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 HJURPQ8NCD3 748 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 RAB8BQ92930 207 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 LRRC46Q96FV0 321 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 BPIFA3Q9BQP9 254 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 C1QTNF7Q9BXJ2 289 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF214Q9UL59 606 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TESMINQ9Y4I5 508 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TANC2Q9HCD6 1990 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 BICRAQ9NZM4 1560 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 COX4I1P13073 169 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SERPINA4P29622 427 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 OR2B6P58173 313 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 NKX6-1P78426 367 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PIN1Q13526 163 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ERV3-1Q14264 604 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 WDR53Q7Z5U6 358 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ERO1BQ86YB8 467 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 AARSD1Q9BTE6 412 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TTLL2Q9BWV7 592 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 EFCAB1Q9HAE3 211 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PHTF1Q9UMS5 762 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SNX12Q9UMY4 172 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 KIAA0586Q9BVV6 1533 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CCDC182A6NF36 153 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CCDC154A6NI56 674 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CA3P07451 260 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GNAO1P09471 354 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 GNSP15586 552 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MC4RP32245 332 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SLC1A1P43005 524 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MARCKSL1P49006 195 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF765Q7L2R6 523 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SNX29P2Q8IUI4 249 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 STK40Q8N2I9 435 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PCDH19Q8TAB3 1148 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 FRMD8P1Q9BZ68 369 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ADARB2Q9NS39 739 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 HEBP2Q9Y5Z4 205 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PEAK1Q9H792 1746 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SH2D7A6NKC9 451 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 SNAP91O60641 907 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 MED26O95402 600 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 TRUB2O95900 331 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 ATF4P18848 351 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CAP1Q01518 475 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CERS5Q8N5B7 392 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 KREMEN2Q8NCW0 462 aa3.24□□□□□ -1.89
SYNE2-212ENST00000554584 PCNPQ8WW12 178 aaKnown RBP3.24□□□□□ -1.89
SYNE2-212ENST00000554584 CRELD1Q96HD1 420 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms