RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ABCG8Q9H221 673 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 SUDS3Q9H7L9 328 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 SGK2Q9HBY8 427 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 IL26Q9NPH9 171 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 WSB2Q9NYS7 404 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 MOCS1Q9NZB8 636 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 IL1RAPL1Q9NZN1 696 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 NFKBIL1Q9UBC1 381 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 PNMA8BQ9ULN7 279 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 PKP3Q9Y446 797 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 CACNA1HO95180 2353 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 TBC1D3DA0A087WVF3 549 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TBC1D3IA0A087WXS9 549 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TBC1D3EA0A087X179 549 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TBC1D3KA0A087X1G2 549 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TCRBV9S1A1TA0A576 114 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 RGSL1A5PLK6 1076 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TBC1D3FA6NER0 549 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 LRRC72A6NJI9 287 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 FAM159BA6NKW6 160 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 CXorf49A8MYA2 514 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TBC1D3LB9A6J9 549 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 GOLGA8KD6RF30 607 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 GOLGA8TH3BQL2 631 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 RAD51BO15315 384 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 LATO43561 262 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 FOXS1O43638 330 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 SPAG6O75602 509 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 PIAS1O75925 651 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TM7SF2O76062 418 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 VAPBO95292 243 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 SOD1P00441 154 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 GOT2P00505 430 aaKnown RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 IGHV4-34P06331 123 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 ABHD2P08910 425 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TBC1D3HP0C7X1 549 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 PRSS56P0CW18 603 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 ERVK-10P10266 1014 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 BCKDHBP21953 392 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 CD6P30203 668 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 OXTRP30559 389 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 FOXN2P32314 431 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 SPAM1P38567 509 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 HADHAP40939 763 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 PI4KAP42356 2102 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 CCR5P51681 352 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 DCDC1P59894 354 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 RPS21P63220 83 aaKnown RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 PRAMEP78395 509 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 CSTF1Q05048 431 aaKnown RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 SLC29A2Q14542 456 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 EFTUD2Q15029 972 aaKnown RBP eCLIP6.21□□□□□ -1.422e-6■□□□□ 10.8
SCFD1-212ENST00000554486 ACOX1Q15067 660 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 CHRNA6Q15825 494 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 LONRF1Q17RB8 773 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 WSCD2Q2TBF2 565 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 HENMT1Q5T8I9 393 aaKnown RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TEDDM1Q5T9Z0 273 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 ALS2CLQ60I27 953 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 KIAA0895LQ68EN5 471 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TBC1D3GQ6DHY5 549 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TBC1D3CQ6IPX1 549 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 KIAA1161Q6NSJ0 714 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TCTN3Q6NUS6 607 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 AFTPHQ6ULP2 937 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 FAM151BQ6UXP7 276 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 CYS1Q717R9 158 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TRIM69Q86WT6 500 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 PIANPQ8IYJ0 282 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 NRSN1Q8IZ57 195 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 TBC1D3Q8IZP1 549 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 PNPLA1Q8N8W4 532 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF480Q8WV37 535 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 ASB12Q8WXK4 309 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 SCAMP4Q969E2 229 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 CERS2Q96G23 380 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 PLEKHG4BQ96PX9 1271 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 DMRTA2Q96SC8 542 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 AGAP2Q99490 1192 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 RIOK2Q9BVS4 552 aaKnown RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 GPR174Q9BXC1 333 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 C1QTNF3Q9BXJ4 246 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 C12orf65Q9H3J6 166 aaKnown RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 FAM83DQ9H4H8 585 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 FAM96AQ9H5X1 160 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 C6orf106Q9H6K1 298 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 VPS37BQ9H9H4 285 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 BCO1Q9HAY6 547 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 SMYD2Q9NRG4 433 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 C20orf96Q9NUD7 363 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 PKD2L2Q9NZM6 624 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 MARCH4Q9P2E8 410 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-212ENST00000554486 SLC17A6Q9P2U8 582 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 CD84Q9UIB8 345 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 PCDHB1Q9Y5F3 818 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 WDR87Q6ZQQ6 2873 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 FANCMQ8IYD8 2048 aa6.21□□□□□ -1.42
SCFD1-212ENST00000554486 WDFY4Q6ZS81 3184 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 VPS13AQ96RL7 3174 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 A0A087WUV0 522 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms