RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 NUP153P49790 1475 aaKnown RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 C15orf61A6NNL5 157 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 B4DLN1 442 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 XRCC3O43542 346 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 WDPCPO95876 746 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 GJA1P17302 382 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 ACSL1P33121 698 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 PTGER3P43115 390 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 SLC15A1P46059 708 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 MRPL12P52815 198 aaKnown RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 PNLIPRP2P54317 469 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 MAZP56270 477 aaKnown RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 DCAF7P61962 342 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 CYCSP99999 105 aaKnown RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 FASTKD3Q14CZ7 662 aaKnown RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 KLHL26Q53HC5 615 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 TMPRSS11FQ6ZWK6 438 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 RSRC2Q7L4I2 434 aaKnown RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 MAATS1Q7Z4T9 603 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 PTAR1Q7Z6K3 402 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 LDB1Q86U70 411 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 CDK20Q8IZL9 346 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 GPRC5AQ8NFJ5 357 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 OR5M8Q8NGP6 311 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 VANGL1Q8TAA9 524 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 SMAP2Q8WU79 429 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 AZIN2Q96A70 460 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 ARSGQ96EG1 525 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 FOXN4Q96NZ1 517 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 URM1Q9BTM9 101 aaKnown RBP3.35□□□□□ -1.87
SCFD1-210ENST00000553693 PANK3Q9H999 370 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 PSD3Q9NYI0 1048 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 SWAP70Q9UH65 585 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 PLAGL1Q9UM63 463 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 AGRNO00468 2067 aa3.35□□□□□ -1.87
SCFD1-210ENST00000553693 CAMSAP1Q5T5Y3 1602 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 RAPGEF6Q8TEU7 1601 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 C3P01024 1663 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 HEPACAM2A8MVW5 462 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 PTGES3LE9PB15 166 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 AP3D1O14617 1153 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 TOM1O60784 492 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 ZSCAN5DPP0CG00 497 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 MAPK4P31152 587 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 HADHAP40939 763 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 OPRL1P41146 370 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 RPL21P46778 160 aaKnown RBP3.34□□□□□ -1.87
SCFD1-210ENST00000553693 SLC9A3P48764 834 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 TPD52P55327 224 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-210ENST00000553693 GEMIN4P57678 1058 aaKnown RBP3.34□□□□□ -1.87
SCFD1-210ENST00000553693 DDX10Q13206 875 aaKnown RBP3.34□□□□□ -1.87
SCFD1-210ENST00000553693 ITPRIPL2Q3MIP1 535 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 LYSMD4Q5XG99 296 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 FIGLAQ6QHK4 219 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 TMEM139Q8IV31 216 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-210ENST00000553693 OR13C3Q8NGS6 347 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 ZNF519Q8TB69 540 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 ZFAND2BQ8WV99 257 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 GTF3AQ92664 365 aaKnown RBP3.34□□□□□ -1.87
SCFD1-210ENST00000553693 MPP4Q96JB8 637 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 OSGEPL1Q9H4B0 414 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 SYNCQ9H7C4 482 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 FAM120CQ9NX05 1096 aaKnown RBP3.34□□□□□ -1.87
SCFD1-210ENST00000553693 P4HTMQ9NXG6 502 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 ARHGEF38Q9NXL2 777 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 NUDT4Q9NZJ9 180 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 TUBE1Q9UJT0 475 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 FBXO2Q9UK22 296 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-210ENST00000553693 ZNF541Q9H0D2 1346 aa3.34□□□□□ -1.87
SCFD1-210ENST00000553693 PLCH2O75038 1416 aa3.34□□□□□ -1.88
SCFD1-210ENST00000553693 PRXQ9BXM0 1461 aa3.34□□□□□ -1.88
SCFD1-210ENST00000553693 CFAP74Q9C0B2 1584 aa3.34□□□□□ -1.88
SCFD1-210ENST00000553693 TDRD15B5MCY1 1934 aaKnown RBP3.33□□□□□ -1.88
SCFD1-210ENST00000553693 MEX3AA1L020 520 aaKnown RBP3.33□□□□□ -1.88
SCFD1-210ENST00000553693 VILLO15195 856 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 PAPSS1O43252 624 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-210ENST00000553693 MAGEC1O60732 1142 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 GABRA5P31644 462 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 LEPRP48357 1165 aaKnown RBP3.33□□□□□ -1.88
SCFD1-210ENST00000553693 GUCY2DQ02846 1103 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 IRF3Q14653 427 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 ODF4Q2M2E3 257 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 CCDC30Q5VVM6 783 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 KRT79Q5XKE5 535 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 NUDT13Q86X67 352 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 CEP57L1Q8IYX8 460 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 ARHGAP24Q8N264 748 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 NPEPL1Q8NDH3 523 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 PRSS33Q8NF86 280 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 SKA1Q96BD8 255 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 PANK2Q9BZ23 570 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 TRIM6Q9C030 488 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-210ENST00000553693 MMP27Q9H306 513 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 SPHK2Q9NRA0 654 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 GKN1Q9NS71 199 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 TEX10Q9NXF1 929 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-210ENST00000553693 STK26Q9P289 416 aa3.33□□□□□ -1.88
SCFD1-210ENST00000553693 B3GAT1Q9P2W7 334 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms