RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ERVK-10P10266 1014 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 PKMP14618 531 aaKnown RBP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 PPARGP37231 505 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 PMS2P54278 862 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 TIAL1Q01085 375 aaKnown RBP eCLIP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 ATP1A4Q13733 1029 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 NCF4Q15080 339 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 SF1Q15637 639 aaKnown RBP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 CRTC2Q53ET0 693 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 MLIPQ5VWP3 458 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 SYVN1Q86TM6 617 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 N4BP2L2Q92802 583 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 SLC6A20Q9NP91 592 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 IARS2Q9NSE4 1012 aaKnown RBP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 ABCF3Q9NUQ8 709 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 EURLQ9NYK6 297 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 HELZ2Q9BYK8 2649 aaKnown RBP17.5■□□□□ 0.39
SHMT2-206ENST00000553529 LOC105369274A0A096LPK9 316 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 LOC102723532A0A0G2JNH3 316 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 CTAGE9A4FU28 777 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 KLF7O75840 302 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-206ENST00000553529 MATN4O95460 622 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 STATHP02808 62 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 IVDP26440 423 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 GABRB3P28472 473 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 OTX2P32243 289 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 GCGRP47871 477 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 FNTAP49354 379 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 CCL11P51671 97 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 TSTA3Q13630 321 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-206ENST00000553529 PPP1R7Q15435 360 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 LACTB2Q53H82 288 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-206ENST00000553529 HSP90AA5PQ58FG0 334 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 RBM20Q5T481 1227 aaKnown RBP17.5■□□□□ 0.39
SHMT2-206ENST00000553529 FIGLAQ6QHK4 219 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 SHISA6Q6ZSJ9 500 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 SDCCAG8Q86SQ7 713 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-206ENST00000553529 LRRC6Q86X45 466 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 CREG2Q8IUH2 290 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 MCATQ8IVS2 390 aaKnown RBP17.5■□□□□ 0.39
SHMT2-206ENST00000553529 CPNE9Q8IYJ1 553 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 OR4N4Q8N0Y3 316 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 PKP4Q99569 1192 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 GPR21Q99679 349 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 GPR87Q9BY21 358 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 NLNQ9BYT8 704 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 LUZP4Q9P127 313 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 ASIC3Q9UHC3 531 aa17.5■□□□□ 0.39
SHMT2-206ENST00000553529 A6NL46 340 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 AP3B1O00203 1094 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 DNALI1O14645 258 aaPredicted RBP17.49■□□□□ 0.39
SHMT2-206ENST00000553529 ZSCAN12O43309 604 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 RFPL1O75677 317 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 USP1O94782 785 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 ESR1P03372 595 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 MLNP12872 115 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 GNG11P61952 73 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 PTK6Q13882 451 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 ATG14Q6ZNE5 492 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 PIWIL4Q7Z3Z4 852 aaKnown RBP17.49■□□□□ 0.39
SHMT2-206ENST00000553529 PPIL6Q8IXY8 311 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 GPR135Q8IZ08 494 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 OR2A1Q8NGT9 310 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 PDLIM2Q96JY6 352 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 XAB2Q9HCS7 855 aaKnown RBP17.49■□□□□ 0.39
SHMT2-206ENST00000553529 TUBD1Q9UJT1 453 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 PLCL2Q9UPR0 1127 aa17.49■□□□□ 0.39
SHMT2-206ENST00000553529 TLN1Q9Y490 2541 aaKnown RBP17.48■□□□□ 0.39
SHMT2-206ENST00000553529 IGKV1-8A0A0C4DH67 115 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 A0A0J9YVX5 310 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 E5RI56 91 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 FFAR3O14843 346 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 GPR42O15529 346 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 RAB40ALP0C0E4 278 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 SARNPP82979 210 aaKnown RBP17.48■□□□□ 0.39
SHMT2-206ENST00000553529 THOC5Q13769 683 aaKnown RBP17.48■□□□□ 0.39
SHMT2-206ENST00000553529 CRYMQ14894 314 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 LONRF1Q17RB8 773 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 RNF187Q5TA31 235 aaPredicted RBP17.48■□□□□ 0.39
SHMT2-206ENST00000553529 RHBDD2Q6NTF9 364 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 MBOAT1Q6ZNC8 495 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 TTLL10Q6ZVT0 673 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 COX15Q7KZN9 410 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 KCNMB4Q86W47 210 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 OR2L3Q8NG85 312 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 GSDMBQ8TAX9 411 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 CD200R1Q8TD46 325 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 DLG3Q92796 817 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 RAD51AP1Q96B01 352 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 ING2Q9H160 280 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 NDOR1Q9UHB4 597 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 ADAMTS6Q9UKP5 1117 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 FBXO5Q9UKT4 447 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 PTRH2Q9Y3E5 179 aaKnown RBP17.48■□□□□ 0.39
SHMT2-206ENST00000553529 MAU2Q9Y6X3 613 aa17.48■□□□□ 0.39
SHMT2-206ENST00000553529 CYSRT1A8MQ03 144 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 F8W8V4 182 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 TP73O15350 636 aa17.47■□□□□ 0.39
SHMT2-206ENST00000553529 TTI1O43156 1089 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms