RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 RP1P56715 2156 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 PABPN1LA6NDY0 278 aaKnown RBP10.26□□□□□ -0.77
PTCH1-225ENST00000551845 ARHGEF33A8MVX0 844 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 PYCARD-AS1I3L0S3 204 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 MYO1CO00159 1063 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 SLU7O95391 586 aaKnown RBP10.26□□□□□ -0.77
PTCH1-225ENST00000551845 ACSL3O95573 720 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 C1QAP02745 245 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 UGT2B7P16662 529 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 STMN1P16949 149 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 CD82P27701 267 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 OAS2P29728 719 aaKnown RBP10.26□□□□□ -0.77
PTCH1-225ENST00000551845 DEKP35659 375 aaKnown RBP10.26□□□□□ -0.77
PTCH1-225ENST00000551845 PCBP4P57723 403 aaKnown RBP10.26□□□□□ -0.77
PTCH1-225ENST00000551845 SH3BP2P78314 561 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 SP140Q13342 867 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 CYP2A13Q16696 494 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 SLC5A12Q1EHB4 618 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 FBXO38Q6PIJ6 1188 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 TRMT10CQ7L0Y3 403 aaKnown RBP10.26□□□□□ -0.77
PTCH1-225ENST00000551845 D2HGDHQ8N465 521 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 BMPERQ8N8U9 685 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 LRRN4CLQ8ND94 238 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 ZNF248Q8NDW4 579 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 HMGCLL1Q8TB92 370 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.26□□□□□ -0.77
PTCH1-225ENST00000551845 SMPDL3AQ92484 453 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 ANKRD7Q92527 254 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 ZUFSPQ96AP4 578 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 MRRFQ96E11 262 aaKnown RBP10.26□□□□□ -0.77
PTCH1-225ENST00000551845 TCTN2Q96GX1 697 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 CCDC138Q96M89 665 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 PPM1MQ96MI6 270 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 TRAPPC9Q96Q05 1148 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 OR6C1Q96RD1 312 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 CTRCQ99895 268 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 MENTQ9BUN1 341 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 FUT8Q9BYC5 575 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 PITPNM3Q9BZ71 974 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 POPDC3Q9HBV1 291 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 SOHLH2Q9NX45 425 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 SPHK1Q9NYA1 384 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 RARRES3Q9UL19 164 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 B3GALT1Q9Y5Z6 326 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 IKBKGQ9Y6K9 419 aa10.26□□□□□ -0.77
PTCH1-225ENST00000551845 ZNF106Q9H2Y7 1883 aaKnown RBP10.25□□□□□ -0.77
PTCH1-225ENST00000551845 UNC13CQ8NB66 2214 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 A0A087WUV0 522 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-225ENST00000551845 A0A0J9YY10 115 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 C9orf172C9J069 976 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 ERVH48-1M5A8F1 160 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 PRAMEF10O60809 474 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 FAM155BO75949 473 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 FKBP9O95302 570 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 FOLR1P15328 257 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 ST6GAL1P15907 406 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 MSH2P43246 934 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 PGGT1BP53609 377 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 PMS2P54278 862 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 PNLIPRP1P54315 467 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 UAP1Q16222 522 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-225ENST00000551845 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.25□□□□□ -0.77
PTCH1-225ENST00000551845 LGSNQ5TDP6 509 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 TMEM207Q6UWW9 146 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 RAPH1Q70E73 1250 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 PPP1R3BQ86XI6 285 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 RASGRP3Q8IV61 690 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 SPNS2Q8IVW8 549 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 CEP97Q8IW35 865 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 SYTL1Q8IYJ3 562 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 LINC01555Q8NAE3 123 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 SNIP1Q8TAD8 396 aaKnown RBP10.25□□□□□ -0.77
PTCH1-225ENST00000551845 DENND1AQ8TEH3 1009 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 N4BP2L2Q92802 583 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-225ENST00000551845 FCRL4Q96PJ5 515 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 GPR22Q99680 433 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 DPH1Q9BZG8 443 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 TWSG1Q9GZX9 223 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 ACSS3Q9H6R3 686 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 FGF21Q9NSA1 209 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 INTS7Q9NVH2 962 aaKnown RBP10.25□□□□□ -0.77
PTCH1-225ENST00000551845 SERTAD3Q9UJW9 196 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 ACSL6Q9UKU0 697 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 PDE10AQ9Y233 779 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 BTRCQ9Y297 605 aa10.25□□□□□ -0.77
PTCH1-225ENST00000551845 TARM1B6A8C7 271 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 PRICKLE3O43900 615 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-225ENST00000551845 TSPAN12O95859 305 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 SLC16A8O95907 504 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 INHBAP08476 426 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 ENO2P09104 434 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-225ENST00000551845 EBLN1P0CF75 366 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 FGF5P12034 268 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 PVRP15151 417 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 ZNF37AP17032 561 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-225ENST00000551845 CRABP2P29373 138 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 RPA3P35244 121 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-225ENST00000551845 RAB10P61026 200 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 TUBB3Q13509 450 aa10.24□□□□□ -0.77
PTCH1-225ENST00000551845 TSTA3Q13630 321 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms