RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 NCAPH2Q6IBW4 605 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 OLFML1Q6UWY5 402 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 DENND5BQ6ZUT9 1274 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 RTL10Q7L3V2 364 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 HIST3H2AQ7L7L0 130 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 RFX6Q8HWS3 928 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 NAXDQ8IW45 347 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 GJC3Q8NFK1 279 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TSPAN14Q8NG11 270 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 RPLP0P6Q8NHW5 317 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 CTCFLQ8NI51 663 aaPredicted RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 LNX1Q8TBB1 728 aaPredicted RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 HASPINQ8TF76 798 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TMEM170AQ8WVE7 144 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TEKT4Q8WW24 435 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 LPGAT1Q92604 370 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 SMARCD2Q92925 531 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 FBXL8Q96CD0 374 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 ERLEC1Q96DZ1 483 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 MED8Q96G25 268 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 CFAP57Q96MR6 1250 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 ZNF570Q96NI8 536 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 FIZ1Q96SL8 496 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 MACROD1Q9BQ69 325 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TUBB6Q9BUF5 446 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 RTN4RQ9BZR6 473 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 NAPBQ9H115 298 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 C2orf40Q9H1Z8 148 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 AZI2Q9H6S1 392 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 MAGEE1Q9HCI5 957 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 TRPV5Q9NQA5 729 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 DECR2Q9NUI1 292 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 DDX43Q9NXZ2 648 aaKnown RBP3.74□□□□□ -1.81
LIMA1-208ENST00000551691 C5AR2Q9P296 337 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 WDR35Q9P2L0 1181 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 MOSPD1Q9UJG1 213 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 PILRBQ9UKJ0 227 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 KLHL20Q9Y2M5 609 aa3.74□□□□□ -1.81
LIMA1-208ENST00000551691 BAZ2BQ9UIF8 2168 aaKnown RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 KIF26AQ9ULI4 1882 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 NIPBLQ6KC79 2804 aaeCLIP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 NAV3Q8IVL0 2385 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 A0A0U1RQK1 487 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 FAM237AA0A1B0GTK4 181 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ZNF320A2RRD8 509 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 H0YAE9 185 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 H7C1Q1 480 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 EBAG9O00559 213 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 OGG1O15527 345 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 TADA2AO75478 443 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 TRUB2O95900 331 aaKnown RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 BCL10O95999 233 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 CCNE2O96020 404 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 LCKP06239 509 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 HLA-EP13747 358 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ETFAP13804 333 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 MMP9P14780 707 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ITGAXP20702 1163 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 PCSK6P29122 969 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 MC5RP33032 325 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 HSPA4P34932 840 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 OR1D2P34982 312 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 GPC3P51654 580 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 BMXP51813 675 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 HAND2P61296 217 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 YWHAHQ04917 246 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 GFPT1Q06210 699 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 GRSF1Q12849 480 aaKnown RBP eCLIP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 NAE1Q13564 534 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 DMC1Q14565 340 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 SLMAPQ14BN4 828 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 E2F5Q15329 346 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 TEAD2Q15562 447 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ZNF674Q2M3X9 581 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 USP41Q3LFD5 358 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 AWAT1Q58HT5 328 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 CXorf66Q5JRM2 361 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 STXBP5Q5T5C0 1151 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 C6orf163Q5TEZ5 329 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 VWA5B1Q5TIE3 1220 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 KRT79Q5XKE5 535 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ZSCAN25Q6NSZ9 544 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 FUT10Q6P4F1 479 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 AAGABQ6PD74 315 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 SLC2A7Q6PXP3 512 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ZNF474Q6S9Z5 364 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 Q6YL49 198 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 RBM44Q6ZP01 1051 aaKnown RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ERN2Q76MJ5 926 aaKnown RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 CAMKMTQ7Z624 323 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 RALGPS2Q86X27 583 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 ADGRG3Q86Y34 549 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 KLHL7Q8IXQ5 586 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 CADM3Q8N126 398 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 Q8NFD4 153 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 OR8K5Q8NH50 307 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 GRK7Q8WTQ7 553 aa3.73□□□□□ -1.81
LIMA1-208ENST00000551691 FRAT1Q92837 279 aaPredicted RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 RRNAD1Q96FB5 475 aaKnown RBP3.73□□□□□ -1.81
LIMA1-208ENST00000551691 HES6Q96HZ4 224 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms