RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CHRAC1Q9NRG0 131 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 PIH1D1Q9NWS0 290 aaKnown RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 SYBUQ9NX95 663 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 RAB21Q9UL25 225 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 NFU1Q9UMS0 254 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 ARL5AQ9Y689 179 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 FAM169AQ9Y6X4 670 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 PLXND1Q9Y4D7 1925 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 BPTFQ12830 3046 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 TRBV5-4A0A0C4DH59 114 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 GLYATL1P3A0A0U1RQE8 302 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 ZCWPW2A0A1B0GU75 182 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 FAM47DPA6NHR8 397 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 A6NNZ2 444 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 AGAP14A8MT82 685 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 MEI4A8MW99 385 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 A8MX80 341 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 PRR5-ARHGAP8B1AHC4 643 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 GPR89AB7ZAQ6 455 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 FPGTO14772 594 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 PFDN6O15212 129 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 DNAJC6O75061 913 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 SRP72O76094 671 aaKnown RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 GPR89BP0CG08 455 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 GYPEP15421 78 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 GM2AP17900 193 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 CTSSP25774 331 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 PHBP35232 272 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 TRIM23P36406 574 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 PPARGP37231 505 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 ARCN1P48444 511 aaKnown RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 TTPAP49638 278 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 GZMKP49863 264 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 TERF1P54274 439 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 YPEL5P62699 121 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 VSNL1P62760 191 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 CRADDP78560 199 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 TMPRSS15P98073 1019 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 XIAPP98170 497 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 MEF2AQ02078 507 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 CACNG1Q06432 222 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 NFATC2Q13469 925 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 CRYMQ14894 314 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 PTPRRQ15256 657 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 LONRF1Q17RB8 773 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 KCTD19Q17RG1 926 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 WSCD2Q2TBF2 565 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 PLK5Q496M5 336 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 MAP9Q49MG5 647 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 RABL3Q5HYI8 236 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 RNF187Q5TA31 235 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 LYSMD4Q5XG99 296 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 PMS2CLQ68D20 193 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 DENND2CQ68D51 928 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 MRNIPQ6NTE8 343 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 PNCKQ6P2M8 343 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 AFTPHQ6ULP2 937 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 KYAT3Q6YP21 454 aaKnown RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 CERS6Q6ZMG9 384 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 KIAA0408Q6ZU52 694 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 LHFPL2Q6ZUX7 228 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 ABI3BPQ7Z7G0 1075 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 CCDC25Q86WR0 208 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 LILRA3Q8N6C8 439 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 AMER2Q8N7J2 671 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 GPR26Q8NDV2 337 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 FBXO36Q8NEA4 188 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 MYRIPQ8NFW9 859 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 OR4K2Q8NGD2 314 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 GPR150Q8NGU9 434 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 GSDMBQ8TAX9 411 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 AENQ8WTP8 325 aaKnown RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 CAVIN3Q969G5 261 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 HDAC10Q969S8 669 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 SKA1Q96BD8 255 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 AP2M1Q96CW1 435 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 CDKN2AIPNLQ96HQ2 116 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 SERAC1Q96JX3 654 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 DNAJC1Q96KC8 554 aaKnown RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 SMIM14Q96QK8 99 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 FAM167BQ9BTA0 163 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 RIOK2Q9BVS4 552 aaKnown RBP5.66□□□□□ -1.5
SCAF11-213ENST00000550629 TEX101Q9BY14 249 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 FUT8Q9BYC5 575 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 PARD6BQ9BYG5 372 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 TXLNGYQ9BZA5 131 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 ABCG8Q9H221 673 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 SAYSD1Q9NPB0 183 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 CD93Q9NPY3 652 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 MOCS1Q9NZB8 636 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 TRPS1Q9UHF7 1281 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 RPS6KL1Q9Y6S9 549 aa5.66□□□□□ -1.5
SCAF11-213ENST00000550629 IGLV3-16A0A075B6K0 115 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 CCDC162PA2VCL2 907 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 CCDC151A5D8V7 595 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 KLHL33A6NCF5 533 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PRR23AA6NEV1 266 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 F8W8V4 182 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms