RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 OR56A5P0C7T3 313 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 PRSS56P0CW18 603 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 CBSLP0DN79 551 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 TPH1P17752 444 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 MSNP26038 577 aaKnown RBP7.34□□□□□ -1.23
NEK3-201ENST00000550331 FOXN2P32314 431 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 CBSP35520 551 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 FOLR3P41439 243 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 NAP1L1P55209 391 aaKnown RBP7.34□□□□□ -1.23
NEK3-201ENST00000550331 DCDP81605 110 aaKnown RBP7.34□□□□□ -1.23
NEK3-201ENST00000550331 KLF1Q13351 362 aaPredicted RBP7.34□□□□□ -1.23
NEK3-201ENST00000550331 POU6F1Q14863 301 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 KIR2DS3Q14952 304 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 ZIC1Q15915 447 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 KYNUQ16719 465 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 DEFB110Q30KQ9 67 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 SYTL3Q4VX76 610 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 DCAF10Q5QP82 559 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 MLIPQ5VWP3 458 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 LYPLAL1Q5VWZ2 237 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 LINC00523Q86TU6 105 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 TRIM73Q86UV7 250 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 IQCKQ8N0W5 287 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 GALNT16Q8N428 558 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 LRRC57Q8N9N7 239 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 FAM71DQ8N9W8 422 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 DENND1AQ8TEH3 1009 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 TM9SF4Q92544 642 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 ELMO1Q92556 727 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 PTERQ96BW5 349 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 MOCOSQ96EN8 888 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 PANX2Q96RD6 677 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 TRIM5Q9C035 493 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 TIMMDC1Q9NPL8 285 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 TXLNGQ9NUQ3 528 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 SPHK1Q9NYA1 384 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 LUZP4Q9P127 313 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 IFT80Q9P2H3 777 aaPredicted RBP7.34□□□□□ -1.23
NEK3-201ENST00000550331 ERRFI1Q9UJM3 462 aaPredicted RBP7.34□□□□□ -1.23
NEK3-201ENST00000550331 RIMKLBQ9ULI2 386 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 PLCL2Q9UPR0 1127 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 PTRH2Q9Y3E5 179 aaKnown RBP7.34□□□□□ -1.23
NEK3-201ENST00000550331 DUSP10Q9Y6W6 482 aa7.34□□□□□ -1.23
NEK3-201ENST00000550331 HEATR9A2RTY3 570 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 CCDC162PA2VCL2 907 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 WIPF3A6NGB9 483 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 SOWAHDA6NJG2 315 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 ERI2A8K979 691 aaKnown RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 MIF4GDA9UHW6 222 aaKnown RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 HCRTR1O43613 425 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 KRT86O43790 486 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 CBX6O95503 412 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 GAS8O95995 478 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 RPN2P04844 631 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 H2AFB1P0C5Y9 115 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 H2AFB2P0C5Z0 115 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 TPBGLP0DKB5 382 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 ARAFP10398 606 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 RAB28P51157 221 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 ARSFP54793 590 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 GDF10P55107 478 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 CDH17Q12864 832 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 RAPSNQ13702 412 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 CYP2A13Q16696 494 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 SLC5A12Q1EHB4 618 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 PLEKHN1Q494U1 663 aaPredicted RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 NKAIN1Q4KMZ8 207 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 DNAJC21Q5F1R6 531 aaKnown RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 C1orf189Q5VU69 101 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 AADACL2Q6P093 401 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 AFTPHQ6ULP2 937 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 Q6ZS92 163 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 MICALCLQ6ZW33 695 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 CHSY3Q70JA7 882 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 PPP1R32Q7Z5V6 425 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 SLC22A15Q8IZD6 547 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 SYCE1Q8N0S2 351 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 DNAJC22Q8N4W6 341 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 ZNF655Q8N720 491 aaPredicted RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 UBL4BQ8N7F7 174 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 SLC35B2Q8TB61 432 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 PEX13Q92968 403 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 FKBP10Q96AY3 582 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 SLC22A18Q96BI1 424 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 SNRNP40Q96DI7 357 aaKnown RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 TTC1Q99614 292 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 BARD1Q99728 777 aaKnown RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 NDC1Q9BTX1 674 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 TSSK1BQ9BXA7 367 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 LACRTQ9GZZ8 138 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 SPRTNQ9H040 489 aaPredicted RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 ILKAPQ9H0C8 392 aaPredicted RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 ZNF552Q9H707 407 aaPredicted RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 SLC24A3Q9HC58 644 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 IRAK4Q9NWZ3 460 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 P4HTMQ9NXG6 502 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 DHCR7Q9UBM7 475 aaKnown RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 REXO2Q9Y3B8 237 aaKnown RBP7.33□□□□□ -1.24
NEK3-201ENST00000550331 PRSS21Q9Y6M0 314 aa7.33□□□□□ -1.24
NEK3-201ENST00000550331 APCP25054 2843 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms