RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HSD17B3P37058 310 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 PRKG2Q13237 762 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 SLC29A2Q14542 456 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 TYSND1Q2T9J0 566 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 HSP90AA5PQ58FG0 334 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 FAM69BQ5VUD6 431 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 CAPN12Q6ZSI9 719 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 GALNT7Q86SF2 657 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 CLDN19Q8N6F1 224 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 ENDOVQ8N8Q3 282 aaKnown RBP12.98□□□□□ -0.33
NUP188-211ENST00000550219 SLC38A9Q8NBW4 561 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 OR8K5Q8NH50 307 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 OR1L3Q8NH93 324 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 CALML6Q8TD86 181 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 FAM167BQ9BTA0 163 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 OR52A5Q9H2C5 316 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 ACSS3Q9H6R3 686 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 ACSS2Q9NR19 701 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 SMYD2Q9NRG4 433 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 C1GALT1Q9NS00 363 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 CATSPERZQ9NTU4 200 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 ANKMY1Q9P2S6 941 aa12.98□□□□□ -0.33
NUP188-211ENST00000550219 FARSAQ9Y285 508 aaKnown RBP12.98□□□□□ -0.33
NUP188-211ENST00000550219 IGLV3-16A0A075B6K0 115 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 A0A087WUV0 522 aaPredicted RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 CXorf49A8MYA2 514 aaPredicted RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 MAP3K7O43318 606 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 OGNP20774 298 aaKnown RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 PRDX3P30048 256 aaKnown RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 CCL11P51671 97 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 PGDP52209 483 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 THOC5Q13769 683 aaKnown RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 UBAP2LQ14157 1087 aaKnown RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 SEMA3AQ14563 771 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 DBN1Q16643 649 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 PTCHD3Q3KNS1 767 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 FASTKD1Q53R41 847 aaKnown RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 LYPLAL1Q5VWZ2 237 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 LCN10Q6JVE6 187 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 MRNIPQ6NTE8 343 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 KIAA0408Q6ZU52 694 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 TRIM73Q86UV7 250 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 ATCAYQ86WG3 371 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 CILP2Q8IUL8 1156 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 APLFQ8IW19 511 aaPredicted RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 DSELQ8IZU8 1212 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 CARFQ8N187 725 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 C2CD4AQ8NCU7 369 aaPredicted RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 THAP4Q8WY91 577 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 MIB2Q96AX9 1013 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 TCF12Q99081 682 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 SLC25A23Q9BV35 468 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 ACTR5Q9H9F9 607 aaPredicted RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 LATS2Q9NRM7 1088 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 IARS2Q9NSE4 1012 aaKnown RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 ACTR10Q9NZ32 417 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 FBXO5Q9UKT4 447 aa12.97□□□□□ -0.33
NUP188-211ENST00000550219 UBR5O95071 2799 aaPredicted RBP12.97□□□□□ -0.33
NUP188-211ENST00000550219 C17orf113A0A1B0GUU1 675 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 C2orf74A8MZ97 194 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 MEN1O00255 615 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 S1PR4O95977 384 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 RECKO95980 971 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 NUDT17P0C025 328 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 NAB1Q13506 487 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 BOP1Q14137 746 aaKnown RBP12.96□□□□□ -0.33
NUP188-211ENST00000550219 ITIH4Q14624 930 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 KBTBD12Q3ZCT8 623 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 SYTL3Q4VX76 610 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 AARS2Q5JTZ9 985 aaKnown RBP12.96□□□□□ -0.33
NUP188-211ENST00000550219 PLEKHS1Q5SXH7 462 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 FAM198BQ6UWH4 519 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 NAPRTQ6XQN6 538 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 SDCCAG8Q86SQ7 713 aaPredicted RBP12.96□□□□□ -0.33
NUP188-211ENST00000550219 SLC26A11Q86WA9 606 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 AMIGO1Q86WK6 493 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 DENND6AQ8IWF6 608 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 SYTL1Q8IYJ3 562 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 OR5AR1Q8NGP9 310 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 GABPB2Q8TAK5 448 aaPredicted RBP12.96□□□□□ -0.33
NUP188-211ENST00000550219 UBLCP1Q8WVY7 318 aaPredicted RBP12.96□□□□□ -0.33
NUP188-211ENST00000550219 ELMO1Q92556 727 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 TFGQ92734 400 aaPredicted RBP12.96□□□□□ -0.33
NUP188-211ENST00000550219 CDKL2Q92772 493 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 N4BP2L2Q92802 583 aaPredicted RBP12.96□□□□□ -0.33
NUP188-211ENST00000550219 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.96□□□□□ -0.33
NUP188-211ENST00000550219 CYTH2Q99418 400 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 MCMBPQ9BTE3 642 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 ING2Q9H160 280 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 MVB12BQ9H7P6 319 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 PCMTD2Q9NV79 361 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.33
NUP188-211ENST00000550219 FETUBQ9UGM5 382 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 ICKQ9UPZ9 632 aa12.96□□□□□ -0.33
NUP188-211ENST00000550219 TTLL8A6PVC2 850 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 E7EQ34 232 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 GABRB3P28472 473 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 RORAP35398 523 aa12.95□□□□□ -0.34
NUP188-211ENST00000550219 PPARGP37231 505 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms