RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 SLC22A18Q96BI1 424 aa21.74■■□□□ 1.07
BRF1-216ENST00000550208 CCDC138Q96M89 665 aa21.74■■□□□ 1.07
BRF1-216ENST00000550208 OR6C1Q96RD1 312 aa21.74■■□□□ 1.07
BRF1-216ENST00000550208 PAFAH2Q99487 392 aa21.74■■□□□ 1.07
BRF1-216ENST00000550208 SOHLH2Q9NX45 425 aa21.74■■□□□ 1.07
BRF1-216ENST00000550208 FOXJ2Q9P0K8 574 aa21.74■■□□□ 1.07
BRF1-216ENST00000550208 BTRCQ9Y297 605 aa21.74■■□□□ 1.07
BRF1-216ENST00000550208 KLHL20Q9Y2M5 609 aa21.74■■□□□ 1.07
BRF1-216ENST00000550208 B3GALT1Q9Y5Z6 326 aa21.74■■□□□ 1.07
BRF1-216ENST00000550208 A0A0J9YY10 115 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 E7ENX8 843 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 POLR1CO15160 346 aaPredicted RBP21.73■■□□□ 1.07
BRF1-216ENST00000550208 INHBAP08476 426 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 HIST1H2AGP0C0S8 130 aaPredicted RBP21.73■■□□□ 1.07
BRF1-216ENST00000550208 CCDC166P0CW27 439 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 HIST1H2ADP20671 130 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 PSMB5P28074 263 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 TAP2Q03519 686 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 TSTA3Q13630 321 aaPredicted RBP21.73■■□□□ 1.07
BRF1-216ENST00000550208 ZIC1Q15915 447 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 DCAF12Q5T6F0 453 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 TMEM164Q5U3C3 297 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 LRRC56Q8IYG6 542 aaPredicted RBP21.73■■□□□ 1.07
BRF1-216ENST00000550208 DCAKDQ8WVC6 231 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 SMPDL3AQ92484 453 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 ANKRD7Q92527 254 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 HIST1H2AHQ96KK5 128 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 HIST1H2AJQ99878 128 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 H2AFJQ9BTM1 129 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.73■■□□□ 1.07
BRF1-216ENST00000550208 PCDHGA3Q9Y5H0 932 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 ANKRD12Q6UB98 2062 aa21.73■■□□□ 1.07
BRF1-216ENST00000550208 NPEPPSL1A6NEC2 478 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 IMPA1P29218 277 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 CRABP2P29373 138 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 YBX1P67809 324 aaKnown RBP21.72■■□□□ 1.07
BRF1-216ENST00000550208 GPR19Q15760 415 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 TMTC4Q5T4D3 741 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 KIAA1614Q5VZ46 1190 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 SBSNQ6UWP8 590 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 RAPH1Q70E73 1250 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 SYTL1Q8IYJ3 562 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 OR2A1Q8NGT9 310 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 UBXN10Q96LJ8 280 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 DDA1Q9BW61 102 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 TRIM54Q9BYV2 358 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 B3GNT4Q9C0J1 378 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 DERL2Q9GZP9 239 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 FAM60AQ9NP50 221 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 PDE7BQ9NP56 450 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 STOX2Q9P2F5 926 aaPredicted RBP21.72■■□□□ 1.07
BRF1-216ENST00000550208 CTNNAL1Q9UBT7 734 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 NOVA2Q9UNW9 492 aaKnown RBP21.72■■□□□ 1.07
BRF1-216ENST00000550208 IKBKGQ9Y6K9 419 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 PCM1Q15154 2024 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 FRYQ5TBA9 3013 aa21.72■■□□□ 1.07
BRF1-216ENST00000550208 EXOC1LA0A1B0GW35 172 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 ZNF839A8K0R7 811 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 SLC35E2BP0CK96 405 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 GCAP28676 217 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 SERPINB9P50453 376 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 RAB15P59190 212 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 ACY1Q03154 408 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 CSHL1Q14406 222 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 CEACAM20Q6UY09 585 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 ZFAND4Q86XD8 727 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 PROSER1Q86XN7 944 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 C19orf47Q8N9M1 422 aaKnown RBP21.71■■□□□ 1.07
BRF1-216ENST00000550208 RNF31Q96EP0 1072 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 MIPEPQ99797 713 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 ACAT2Q9BWD1 397 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 ASPSCR1Q9BZE9 553 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 ATG10Q9H0Y0 220 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 ABCF3Q9NUQ8 709 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 ARL15Q9NXU5 204 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 UTP6Q9NYH9 597 aaKnown RBP21.71■■□□□ 1.07
BRF1-216ENST00000550208 RAXQ9Y2V3 346 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 PCDHB11Q9Y5F2 797 aa21.71■■□□□ 1.07
BRF1-216ENST00000550208 SNRNP200O75643 2136 aaKnown RBP21.71■■□□□ 1.07
BRF1-216ENST00000550208 TPRP12270 2363 aaKnown RBP21.7■■□□□ 1.07
BRF1-216ENST00000550208 GUCA1CO95843 209 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 C2P06681 752 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 CD1DP15813 335 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 MAGP20916 626 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 RPA3P35244 121 aaPredicted RBP21.7■■□□□ 1.06
BRF1-216ENST00000550208 CSRP3P50461 194 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 DLG1Q12959 904 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 IL11RAQ14626 422 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 NAA30Q147X3 362 aaPredicted RBP21.7■■□□□ 1.06
BRF1-216ENST00000550208 TSNQ15631 228 aaKnown RBP21.7■■□□□ 1.06
BRF1-216ENST00000550208 ZXDCQ2QGD7 858 aaPredicted RBP21.7■■□□□ 1.06
BRF1-216ENST00000550208 WDR93Q6P2C0 686 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 FIGLAQ6QHK4 219 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 AGTRAPQ6RW13 159 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 CDHR3Q6ZTQ4 885 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 UBLCP1Q8WVY7 318 aaPredicted RBP21.7■■□□□ 1.06
BRF1-216ENST00000550208 TCTN2Q96GX1 697 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 DHRS4Q9BTZ2 278 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 PARD6BQ9BYG5 372 aa21.7■■□□□ 1.06
BRF1-216ENST00000550208 SNX15Q9NRS6 342 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms