RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-222ENST00000550155 ZNF486Q96H40 463 aaPredicted RBP3.82□□□□□ -1.8
CNOT2-222ENST00000550155 C10orf90Q96M02 699 aa3.82□□□□□ -1.8
CNOT2-222ENST00000550155 WNT5BQ9H1J7 359 aa3.82□□□□□ -1.8
CNOT2-222ENST00000550155 OPA3Q9H6K4 179 aa3.82□□□□□ -1.8
CNOT2-222ENST00000550155 MED20Q9H944 212 aa3.82□□□□□ -1.8
CNOT2-222ENST00000550155 ZNF69Q9UC07 566 aa3.82□□□□□ -1.8
CNOT2-222ENST00000550155 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.82□□□□□ -1.8
CNOT2-222ENST00000550155 STUB1Q9UNE7 303 aa3.82□□□□□ -1.8
CNOT2-222ENST00000550155 TRIM17Q9Y577 477 aa3.82□□□□□ -1.8
CNOT2-222ENST00000550155 PCDH11YQ9BZA8 1340 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 IGHV3OR16-10A0A075B7F0 116 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 A0A1W2PQ09 198 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 MPTX1A8MV57 137 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 OR10H2O60403 315 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 TSPAN9O75954 239 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 SEC24AO95486 1093 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 PRKAR1AP10644 381 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 CAPN2P17655 700 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 RBMS1P29558 406 aaKnown RBP3.81□□□□□ -1.8
CNOT2-222ENST00000550155 HLA-FP30511 346 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 NAP1L1P55209 391 aaKnown RBP3.81□□□□□ -1.8
CNOT2-222ENST00000550155 MC1RQ01726 317 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 LMOD3Q0VAK6 560 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 TAF10Q12962 218 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 XKR3Q5GH77 459 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 SLC35D3Q5M8T2 416 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 Q8N377 158 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 TEX19Q8NA77 164 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 FAM120BQ96EK7 910 aaKnown RBP3.81□□□□□ -1.8
CNOT2-222ENST00000550155 SFXN2Q96NB2 322 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 GAL3ST4Q96RP7 486 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 MTMR12Q9C0I1 747 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 TRPV4Q9HBA0 871 aa3.81□□□□□ -1.8
CNOT2-222ENST00000550155 MYH15Q9Y2K3 1946 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 ASB14A6NK59 587 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 IGHV3-13P01766 116 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 IGHEP01854 428 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 JAK1P23458 1154 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 NRIP1P48552 1158 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 COX10Q12887 443 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 CALCOCO2Q13137 446 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 DUSP28Q4G0W2 176 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 SPDYCQ5MJ68 293 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 NOTUMQ6P988 496 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 KBTBD6Q86V97 674 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 GUF1Q8N442 669 aaKnown RBP3.8□□□□□ -1.8
CNOT2-222ENST00000550155 Q8NBF4 154 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 OR1L3Q8NH93 324 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 PTPMT1Q8WUK0 201 aaPredicted RBP3.8□□□□□ -1.8
CNOT2-222ENST00000550155 SLAMF9Q96A28 289 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 THOC1Q96FV9 657 aaKnown RBP3.8□□□□□ -1.8
CNOT2-222ENST00000550155 AGAP4Q96P64 663 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 NAP1L4Q99733 375 aaKnown RBP3.8□□□□□ -1.8
CNOT2-222ENST00000550155 TEX12Q9BXU0 123 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 CHST11Q9NPF2 352 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 RARRES3Q9UL19 164 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 CSNK1G3Q9Y6M4 447 aa3.8□□□□□ -1.8
CNOT2-222ENST00000550155 EPM2AB3EWF7 344 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 BCL10O95999 233 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 DARSP14868 501 aaKnown RBP3.79□□□□□ -1.8
CNOT2-222ENST00000550155 TRIM21P19474 475 aaKnown RBP3.79□□□□□ -1.8
CNOT2-222ENST00000550155 STAT2P52630 851 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 LBX1P52954 281 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 GUCY2DQ02846 1103 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 CREB5Q02930 508 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 PAX8Q06710 450 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 SLC25A30Q5SVS4 291 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 RNASEH2BQ5TBB1 312 aaKnown RBP3.79□□□□□ -1.8
CNOT2-222ENST00000550155 TEX38Q6PEX7 206 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 KIF6Q6ZMV9 814 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 SLC39A11Q8N1S5 342 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 LPGAT1Q92604 370 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 OLFM1Q99784 485 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 SHARPINQ9H0F6 387 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 NDE1Q9NXR1 346 aa3.79□□□□□ -1.8
CNOT2-222ENST00000550155 WSB2Q9NYS7 404 aaPredicted RBP3.79□□□□□ -1.8
CNOT2-222ENST00000550155 PTRH2Q9Y3E5 179 aaKnown RBP3.79□□□□□ -1.8
CNOT2-222ENST00000550155 GPR75-ASB3A0A0A6YYF3 556 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 A6NCN8 305 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 TRUB2O95900 331 aaKnown RBP3.78□□□□□ -1.8
CNOT2-222ENST00000550155 HPRP00739 348 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 SMIM18P0DKX4 95 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 ZNF75DP51815 510 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 GCNT1Q02742 428 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 ZNF415Q09FC8 603 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 EFTUD2Q15029 972 aaKnown RBP eCLIP3.78□□□□□ -1.88e-8■■■■□ 25.9
CNOT2-222ENST00000550155 SYT14P1Q58G82 188 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 SZRD1Q7Z422 152 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 METTL4Q8N3J2 472 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 APPL2Q8NEU8 664 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 MIPOL1Q8TD10 442 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 GATAD1Q8WUU5 269 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 SYN2Q92777 582 aaPredicted RBP3.78□□□□□ -1.8
CNOT2-222ENST00000550155 SLC45A3Q96JT2 553 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 PRICKLE1Q96MT3 831 aaPredicted RBP3.78□□□□□ -1.8
CNOT2-222ENST00000550155 SEPHS2Q99611 448 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 RPP25Q9BUL9 199 aaKnown RBP3.78□□□□□ -1.8
CNOT2-222ENST00000550155 THAP2Q9H0W7 228 aa3.78□□□□□ -1.8
CNOT2-222ENST00000550155 B3GAT2Q9NPZ5 323 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms