RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 CARD16Q5EG05 197 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 MANEALQ5VSG8 457 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 LAIR1Q6GTX8 287 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 DESI1Q6ICB0 168 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 DOK6Q6PKX4 331 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 FAM151BQ6UXP7 276 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 CRIPAKQ8N1N5 446 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 UTP15Q8TED0 518 aaKnown RBP10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 GTF2H4Q92759 462 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 FBXO32Q969P5 355 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 ITPKCQ96DU7 683 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 NUSAP1Q9BXS6 441 aaKnown RBP10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 EXOSC4Q9NPD3 245 aaKnown RBP10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 KRT84Q9NSB2 600 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 USE1Q9NZ43 259 aa10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 DNMT3BQ9UBC3 853 aaKnown RBP10.5□□□□□ -0.73
SMARCC2-208ENST00000550150 KRT87PA6NCN2 255 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 CCNKO75909 580 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 SPNP16150 400 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 ITIH1P19827 911 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 PCMT1P22061 227 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 AZGP1P25311 298 aaKnown RBP10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 KCNQ1P51787 676 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 ZXDBP98169 803 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 MTA1Q13330 715 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 TOP3AQ13472 1001 aaPredicted RBP10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 STEAP3Q658P3 488 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 THOC7Q6I9Y2 204 aaKnown RBP10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 TMEM173Q86WV6 379 aaPredicted RBP10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 OR8H2Q8N162 312 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 KCNC2Q96PR1 638 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 TSPAN18Q96SJ8 248 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 EBPLQ9BY08 206 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 CIPCQ9C0C6 399 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 TP63Q9H3D4 680 aaPredicted RBP10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 TPK1Q9H3S4 243 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 CSNK1G1Q9HCP0 422 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 BOLA1Q9Y3E2 137 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 ZNF623O75123 536 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 GABARAPO95166 117 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 WISP3O95389 354 aaPredicted RBP10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 NDST3O95803 873 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 GLUD1P00367 558 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 IRF1P10914 325 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 POU2F1P14859 743 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 LBX1P52954 281 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 RPS24P62847 133 aaKnown RBP10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 ARTNQ5T4W7 220 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 MFSD4BQ5TF39 518 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 AGAP7PQ5VUJ5 663 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 AFTPHQ6ULP2 937 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 ZNF621Q6ZSS3 439 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 UMODL1-AS1Q8N2C9 162 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 UBE2J2Q8N2K1 259 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 MFSD4AQ8N468 514 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 CEP19Q96LK0 163 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 KCNS3Q9BQ31 491 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 TRIM62Q9BVG3 475 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 CRISPLD2Q9H0B8 497 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 KAT8Q9H7Z6 458 aaKnown RBP10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 SCUBE2Q9NQ36 999 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 ANKMY1Q9P2S6 941 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 USP34Q70CQ2 3546 aa10.49□□□□□ -0.73
SMARCC2-208ENST00000550150 LOC285095A0A1B0GVY8 99 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 TAF4O00268 1085 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 FFAR2O15552 330 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 OR1G1P47890 313 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 DMC1Q14565 340 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 CYP27C1Q4G0S4 372 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 SVOPLQ8N434 492 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 RNF175Q8N4F7 328 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 CELF2-AS1Q8N7Q2 184 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 ATP6V0D2Q8N8Y2 350 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 SETD9Q8NE22 299 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 CD200R1Q8TD46 325 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 ATL1Q8WXF7 558 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 ZFYVE19Q96K21 471 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 CNDP2Q96KP4 475 aaKnown RBP10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 EGLN2Q96KS0 407 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 Q96MT0 163 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 GPR63Q9BZJ6 419 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 ATP13A1Q9HD20 1204 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 ERVK-11Q9UQG0 969 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 RGS14O43566 566 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 SSX4O60224 188 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 IGLV3-25P01717 112 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 PRR35P0CG20 571 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 OGNP20774 298 aaKnown RBP10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 S100A3P33764 101 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 MVKQ03426 396 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 FAM214AQ32MH5 1076 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 DEPDC1Q5TB30 811 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 TSPEARQ8WU66 669 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 ISG20Q96AZ6 181 aaKnown RBP10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 APOL4Q9BPW4 351 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 BOCQ9BWV1 1114 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 OPTCQ9UBM4 332 aa10.48□□□□□ -0.73
SMARCC2-208ENST00000550150 TMEFF2Q9UIK5 374 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms