RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 ASB1Q9Y576 335 aa18.37■□□□□ 0.53
MSLN-202ENST00000545450 DFNA5O60443 496 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 TSPAN12O95859 305 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 RB1P06400 928 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 PIRTP0C851 137 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 BMP4P12644 408 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 CDK5R2Q13319 367 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 KIAA0040Q15053 153 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 DGUOKQ16854 277 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 INAVAQ3KP66 663 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 ZNF362Q5T0B9 420 aaPredicted RBP18.36■□□□□ 0.53
MSLN-202ENST00000545450 PLEKHG7Q6ZR37 379 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 APCDD1Q8J025 514 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 OR52B6Q8NGF0 335 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 OR6Q1Q8NGQ2 317 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 NDNFQ8TB73 568 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 NUDT8Q8WV74 236 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 HPS1Q92902 700 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 EFHD2Q96C19 240 aaPredicted RBP18.36■□□□□ 0.53
MSLN-202ENST00000545450 RHBDF1Q96CC6 855 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 CCDC90BQ9GZT6 254 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 TRIT1Q9H3H1 467 aaKnown RBP18.36■□□□□ 0.53
MSLN-202ENST00000545450 SCUBE2Q9NQ36 999 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 EIF2B4Q9UI10 523 aaKnown RBP18.36■□□□□ 0.53
MSLN-202ENST00000545450 PMF1-BGLAPU3KQ54 211 aa18.36■□□□□ 0.53
MSLN-202ENST00000545450 GNGT2O14610 69 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 GSTA4O15217 222 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 PABPC1P11940 636 aaKnown RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 ZC3H12BQ5HYM0 836 aaKnown RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 LETMD1Q6P1Q0 360 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 NEK10Q6ZWH5 1172 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 RTL10Q7L3V2 364 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 DCBLD1Q8N8Z6 715 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 OR5K1Q8NHB7 308 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 FRS2Q8WU20 508 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 HTATIP2Q9BUP3 242 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 SACM1LQ9NTJ5 587 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 NLE1Q9NVX2 485 aaPredicted RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 TMEFF2Q9UIK5 374 aaPredicted RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 INTS6Q9UL03 887 aaKnown RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 M0R3G1 203 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 LSM1O15116 133 aaKnown RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 HS6ST1O60243 411 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 NADKO95544 446 aaPredicted RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 NDST3O95803 873 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 HOXA9P31269 272 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 DCTP40126 519 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 DNASE1L3Q13609 305 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 MPPE1Q53F39 396 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 PAGE2BQ5JRK9 111 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 TMEM179BQ7Z7N9 219 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 DCP2Q8IU60 420 aaKnown RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 ADHFE1Q8IWW8 467 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 DCAF4L2Q8NA75 395 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 PHF10Q8WUB8 498 aaKnown RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 YIPF6Q96EC8 236 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 CDK15Q96Q40 435 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 ANKMY1Q9P2S6 941 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 LHX3Q9UBR4 397 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 FCF1Q9Y324 198 aaKnown RBP18.35■□□□□ 0.53
MSLN-202ENST00000545450 C5orf42Q9H799 3197 aa18.35■□□□□ 0.53
MSLN-202ENST00000545450 PRRC2BQ5JSZ5 2229 aaKnown RBP18.34■□□□□ 0.53
MSLN-202ENST00000545450 PRKD3O94806 890 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 CD6P30203 668 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 SERPINB10P48595 397 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 HTR6P50406 440 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 HIST2H2ACQ16777 129 aaPredicted RBP18.34■□□□□ 0.53
MSLN-202ENST00000545450 AAK1Q2M2I8 961 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 MPP7Q5T2T1 576 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 DEPDC1Q5TB30 811 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 GPSM1Q86YR5 675 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 EID3Q8N140 333 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 ZCCHC7Q8N3Z6 543 aaKnown RBP18.34■□□□□ 0.53
MSLN-202ENST00000545450 OR10A6Q8NH74 314 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 DYNC2LI1Q8TCX1 351 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 STARD8Q92502 1023 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 RORBQ92753 470 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 EXD2Q9NVH0 621 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 REV3LO60673 3130 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 K7ERQ8 282 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 XPNPEP2O43895 674 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 NDUFS3O75489 264 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 SCELO95171 688 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 PRAMEF12O95522 483 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 FGF19O95750 216 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 PRLP01236 227 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 PRKACGP22612 351 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 DDX6P26196 483 aaKnown RBP eCLIP18.34■□□□□ 0.53
MSLN-202ENST00000545450 ZNF140P52738 457 aaPredicted RBP18.34■□□□□ 0.53
MSLN-202ENST00000545450 LMAN2Q12907 356 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 RFX4Q33E94 735 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 INO80DQ53TQ3 878 aaPredicted RBP18.34■□□□□ 0.53
MSLN-202ENST00000545450 PRSS36Q5K4E3 855 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 GRASPQ7Z6J2 395 aaPredicted RBP18.34■□□□□ 0.53
MSLN-202ENST00000545450 ADGRD2Q7Z7M1 963 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 MCOLN3Q8TDD5 553 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 ERLEC1Q96DZ1 483 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 ZNF300Q96RE9 604 aaPredicted RBP18.34■□□□□ 0.53
MSLN-202ENST00000545450 BTBD2Q9BX70 525 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 ALOXE3Q9BYJ1 711 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms