RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015		E5RI56	91 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	FANCG	O15287	622 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	ZSCAN9	O15535	394 aa	Predicted RBP	12.89	□□□□□ -0.35
POLE-222	ENST00000545015	ONECUT2	O95948	504 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	MPC1L	P0DKB6	136 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	CBSL	P0DN79	551 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	CBS	P35520	551 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	BDKRB1	P46663	353 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	PMS2	P54278	862 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	NFATC3	Q12968	1075 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	CTBP1	Q13363	440 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	NAA25	Q14CX7	972 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	KLHL38	Q2WGJ6	581 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	CCSMST1	Q4G0I0	132 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	ACSBG2	Q5FVE4	666 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	KIAA0408	Q6ZU52	694 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	KCNMB4	Q86W47	210 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	C2CD4A	Q8NCU7	369 aa	Predicted RBP	12.89	□□□□□ -0.35
POLE-222	ENST00000545015	GIMAP7	Q8NHV1	300 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.89	□□□□□ -0.35
POLE-222	ENST00000545015	N4BP2L2	Q92802	583 aa	Predicted RBP	12.89	□□□□□ -0.35
POLE-222	ENST00000545015	LRRC39	Q96DD0	335 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	GBP5	Q96PP8	586 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	SPRTN	Q9H040	489 aa	Predicted RBP	12.89	□□□□□ -0.35
POLE-222	ENST00000545015	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.89	□□□□□ -0.35
POLE-222	ENST00000545015	FAM114A2	Q9NRY5	505 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	EURL	Q9NYK6	297 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	TCFL5	Q9UL49	500 aa		12.89	□□□□□ -0.35
POLE-222	ENST00000545015	CDC14C	A4D256	554 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	ARHGEF33	A8MVX0	844 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	GFY	I3L273	518 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	SUV39H1	O43463	412 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	CD63	P08962	238 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	AGXT	P21549	392 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	HSD17B2	P37059	387 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	GRIA3	P42263	894 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	DR1	Q01658	176 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	DHX9	Q08211	1270 aa	Known RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	FRG1	Q14331	258 aa	Known RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	NCF4	Q15080	339 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	SF1	Q15637	639 aa	Known RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	MSS51	Q4VC12	460 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	HSP90AA5P	Q58FG0	334 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	ZC3H12B	Q5HYM0	836 aa	Known RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	SPANXN3	Q5MJ09	141 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	YOD1	Q5VVQ6	348 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	FCRL6	Q6DN72	434 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	HIBCH	Q6NVY1	386 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	CNST	Q6PJW8	725 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	FIGLA	Q6QHK4	219 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	CYHR1	Q6ZMK1	362 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	MCAT	Q8IVS2	390 aa	Known RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	ENDOV	Q8N8Q3	282 aa	Known RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	OR2A1	Q8NGT9	310 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	OR9A1P	Q8NGU1	263 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	C9orf43	Q8TAL5	461 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	CD200R1	Q8TD46	325 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	SKA2	Q8WVK7	121 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	ASB11	Q8WXH4	323 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	INPP5D	Q92835	1189 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	ABHD17A	Q96GS6	310 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	SLC30A3	Q99726	388 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	AARSD1	Q9BTE6	412 aa	Known RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	CCDC68	Q9H2F9	335 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	PLAC1	Q9HBJ0	212 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	RUVBL2	Q9Y230	463 aa	Known RBP	12.88	□□□□□ -0.35
POLE-222	ENST00000545015	SEC16A	O15027	2179 aa		12.88	□□□□□ -0.35
POLE-222	ENST00000545015	GCN1	Q92616	2671 aa	Known RBP	12.87	□□□□□ -0.35
POLE-222	ENST00000545015	FITM1	A5D6W6	292 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015		J3QKU1	62 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	TP73	O15350	636 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	SRPX2	O60687	465 aa	Predicted RBP	12.87	□□□□□ -0.35
POLE-222	ENST00000545015	RFPL1	O75677	317 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	KLF7	O75840	302 aa	Predicted RBP	12.87	□□□□□ -0.35
POLE-222	ENST00000545015	HAUS5	O94927	633 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	CAT	P04040	527 aa	Known RBP	12.87	□□□□□ -0.35
POLE-222	ENST00000545015	CTSB	P07858	339 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	SPTB	P11277	2137 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	SKIV2L2	P42285	1042 aa	Known RBP	12.87	□□□□□ -0.35
POLE-222	ENST00000545015	PAFAH1B1	P43034	410 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	ARSF	P54793	590 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	RPS18	P62269	152 aa	Known RBP	12.87	□□□□□ -0.35
POLE-222	ENST00000545015	MPP1	Q00013	466 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	IL10RA	Q13651	578 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	DEFB110	Q30KQ9	67 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	PTCHD3	Q3KNS1	767 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	TCTE1	Q5JU00	501 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	STEAP4	Q687X5	459 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	LRRC8E	Q6NSJ5	796 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	TCTN3	Q6NUS6	607 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	PDIK1L	Q8N165	341 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	OR2L3	Q8NG85	312 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	SMPDL3A	Q92484	453 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	DLG3	Q92796	817 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	CAPZA3	Q96KX2	299 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	SLC7A5P2	Q9GIP4	190 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	12.87	□□□□□ -0.35
POLE-222	ENST00000545015	ANKMY1	Q9P2S6	941 aa		12.87	□□□□□ -0.35
POLE-222	ENST00000545015	CIDEB	Q9UHD4	219 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms