RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PHLDB2Q86SQ0 1253 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 TRIM74Q86UV6 250 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 OOSP2Q86WS3 158 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 FAM72BQ86X60 149 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 PRIMA1Q86XR5 153 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 GPR135Q8IZ08 494 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 OR1N1Q8NGS0 311 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 SUN3Q8TAQ9 357 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 PROKR1Q8TCW9 393 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 PHF10Q8WUB8 498 aaKnown RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ASB15Q8WXK1 588 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ARSGQ96EG1 525 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 C18orf12Q96KH6 178 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 MCCC1Q96RQ3 725 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 MAP3K3Q99759 626 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 TIMM29Q9BSF4 260 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 LHPPQ9H008 270 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 KLC2Q9H0B6 622 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 MS4A5Q9H3V2 200 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 LRRC19Q9H756 370 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ACP6Q9NPH0 428 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 CCM2LQ9NUG4 571 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 SEPT11Q9NVA2 429 aaKnown RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 GPATCH2LQ9NWQ4 482 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 SOHLH2Q9NX45 425 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF624Q9P2J8 865 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 CD84Q9UIB8 345 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 SERTAD3Q9UJW9 196 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 CFAP45Q9UL16 551 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 PLA2G2DQ9UNK4 145 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 MTMR6Q9Y217 621 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 BTRCQ9Y297 605 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 SIK3Q9Y2K2 1263 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 MEMO1Q9Y316 297 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 PPIL1Q9Y3C6 166 aa3.95□□□□□ -1.78
SNHG1-220ENST00000544550 PTRH2Q9Y3E5 179 aaKnown RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 SETD2Q9BYW2 2564 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-220ENST00000544550 RGSL1A5PLK6 1076 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 TRIM49BA6NDI0 452 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PRAMEF25A6NGN4 478 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 IDSB3KWA1 339 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 TMEM150CB9EJG8 249 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 GOLGA6L22H0YM25 854 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 GOLGA8SH3BPF8 625 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 MATN2O00339 956 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PRAMEF2O60811 474 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 KCNJ13O60928 360 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ZRANB2O95218 330 aaKnown RBP eCLIP3.94□□□□□ -1.782e-9■■■■□ 26.4
SNHG1-220ENST00000544550 PGLSO95336 258 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 LSM8O95777 96 aaKnown RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 GNA14O95837 355 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ATP1A1P05023 1023 aaKnown RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 MMEP08473 750 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 INHBBP09529 407 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PFKFB1P16118 471 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 DESP17661 470 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 IGFBP2P18065 325 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ITGAXP20702 1163 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 UGT1A4P22310 534 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 FDXRP22570 491 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 CMA1P23946 247 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 AOAHP28039 575 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 CDH5P33151 784 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 RFC1P35251 1148 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PPP1R2P41236 205 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PTPN9P43378 593 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 SYKP43405 635 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PAPOLAP51003 745 aaKnown RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 NEK2P51955 445 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 EPHB1P54762 984 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ADAM8P78325 824 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 DCDP81605 110 aaKnown RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PPP2R2BQ00005 443 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 IL10RBQ08334 325 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ABRQ12979 859 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PRKAA1Q13131 559 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 KLF1Q13351 362 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 STIM1Q13586 685 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 CEBPEQ15744 281 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 CR1LQ2VPA4 569 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PTCHD3Q3KNS1 767 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 TDRD12Q587J7 1177 aaKnown RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 FAM69BQ5VUD6 431 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 MLIPQ5VWP3 458 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 TMEM198Q66K66 360 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PLEKHA7Q6IQ23 1121 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 TEPPQ6URK8 271 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ETV3LQ6ZN32 361 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 Q6ZPB1 254 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 FRMD7Q6ZUT3 714 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PPP1R32Q7Z5V6 425 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 TSPAN33Q86UF1 283 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 LRRTM4Q86VH4 590 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 TTC30BQ8N4P2 665 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ADAMTS18Q8TE60 1221 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 NSMCE1Q8WV22 266 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ZFPM2Q8WW38 1151 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 CPA5Q8WXQ8 436 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ALG3Q92685 438 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 SCAMP4Q969E2 229 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms