RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 KRT33BQ14525 404 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 GGTA1PQ4G0N0 100 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 ZNF542PQ5EBM4 170 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 TCHHL1Q5QJ38 904 aaPredicted RBP29.5■■■□□ 2.31
CCM2-219ENST00000544363 WDR5BQ86VZ2 330 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 L3MBTL4Q8NA19 623 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 MAGEB10Q96LZ2 347 aaPredicted RBP29.5■■■□□ 2.31
CCM2-219ENST00000544363 MENTQ9BUN1 341 aa29.5■■■□□ 2.31
CCM2-219ENST00000544363 EML2O95834 649 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 LINC00032P0C843 101 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 PCDH1Q08174 1060 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 CYP2A13Q16696 494 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 LACTB2Q53H82 288 aaPredicted RBP29.49■■■□□ 2.31
CCM2-219ENST00000544363 LARP4Q71RC2 724 aaKnown RBP eCLIP29.49■■■□□ 2.319e-6■■■■■ 29.6
CCM2-219ENST00000544363 PHACTR4Q8IZ21 702 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 GSDMCQ9BYG8 508 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 SLC29A3Q9BZD2 475 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 CCDC177Q9NQR7 707 aaPredicted RBP29.49■■■□□ 2.31
CCM2-219ENST00000544363 GPRC5BQ9NZH0 403 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 ARMCX1Q9P291 453 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 KCNE2Q9Y6J6 123 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 A6NCN8 305 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 ZNF839A8K0R7 811 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 TLR4O00206 839 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 PRAMEF4O60810 478 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 CCND1P24385 295 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 CHIT1Q13231 466 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 PRAMEF9Q5VWM5 478 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 LAYNQ6UX15 382 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 MYLK4Q86YV6 388 aaPredicted RBP29.49■■■□□ 2.31
CCM2-219ENST00000544363 LMNTD1Q8N9Z9 388 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 CCDC106Q9BWC9 280 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 CAAP1Q9H8G2 361 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 COLEC10Q9Y6Z7 277 aa29.49■■■□□ 2.31
CCM2-219ENST00000544363 ATP6AP2A0A1C7CYW4 349 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 CLGNO14967 610 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 UGDHO60701 494 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 VPS4BO75351 444 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 ATP6AP2O75787 350 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 BNIP1Q12981 228 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 TSTA3Q13630 321 aaPredicted RBP29.48■■■□□ 2.31
CCM2-219ENST00000544363 XKR7Q5GH72 579 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 WDR45BQ5MNZ6 344 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 RAB42Q8N4Z0 105 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 SETD7Q8WTS6 366 aaKnown RBP29.48■■■□□ 2.31
CCM2-219ENST00000544363 MIPEPQ99797 713 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 AKTIPQ9H8T0 292 aa29.48■■■□□ 2.31
CCM2-219ENST00000544363 VCANP13611 3396 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 KCNE1BA0A087WTH5 132 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 FFAR3O14843 346 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 GPR42O15529 346 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 WFS1O76024 890 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 F3P13726 295 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 NPPBP16860 134 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 HTR6P50406 440 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 IRF8Q02556 426 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 UBAP2LQ14157 1087 aaKnown RBP29.47■■■□□ 2.31
CCM2-219ENST00000544363 SPRED3Q2MJR0 410 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 LIPJQ5W064 366 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 IL27RAQ6UWB1 636 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 SCIMPQ6UWF3 145 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 SUSD1Q6UWL2 747 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 RNF165Q6ZSG1 346 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 C1orf210Q8IVY1 113 aa29.47■■■□□ 2.31
CCM2-219ENST00000544363 E7EQ34 232 aa29.46■■■□□ 2.31
CCM2-219ENST00000544363 CTSEP14091 401 aa29.46■■■□□ 2.31
CCM2-219ENST00000544363 GNAZP19086 355 aa29.46■■■□□ 2.31
CCM2-219ENST00000544363 NDUFS1P28331 727 aa29.46■■■□□ 2.31
CCM2-219ENST00000544363 CPSF6Q16630 551 aaKnown RBP eCLIP29.46■■■□□ 2.31
CCM2-219ENST00000544363 TMEM198Q66K66 360 aa29.46■■■□□ 2.31
CCM2-219ENST00000544363 LPCAT2Q7L5N7 544 aa29.46■■■□□ 2.31
CCM2-219ENST00000544363 LONP2Q86WA8 852 aa29.46■■■□□ 2.31
CCM2-219ENST00000544363 DYRK1BQ9Y463 629 aa29.46■■■□□ 2.31
CCM2-219ENST00000544363 GON4LQ3T8J9 2241 aa29.46■■■□□ 2.31
CCM2-219ENST00000544363 CAPN14A8MX76 684 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 JUNDP17535 347 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 KRT72Q14CN4 511 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 XKR6Q5GH73 641 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 CHSY3Q70JA7 882 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 ARMCX6Q7L4S7 300 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 MAML2Q8IZL2 1156 aaPredicted RBP29.45■■■□□ 2.31
CCM2-219ENST00000544363 TUBGCP3Q96CW5 907 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 NRTNQ99748 197 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 RAB11FIP5Q9BXF6 653 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 TAAR2Q9P1P5 351 aa29.45■■■□□ 2.31
CCM2-219ENST00000544363 ZNF624Q9P2J8 865 aaPredicted RBP29.45■■■□□ 2.31
CCM2-219ENST00000544363 APOBEC3BQ9UH17 382 aaKnown RBP29.45■■■□□ 2.31
CCM2-219ENST00000544363 MANBAO00462 879 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 ULK1O75385 1050 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 KRT6AP02538 564 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 CSF2P04141 144 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 KRT6BP04259 564 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 JUPP14923 745 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 KRT6CP48668 564 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 RAB28P51157 221 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 CSTF1Q05048 431 aaKnown RBP29.45■■■□□ 2.3
CCM2-219ENST00000544363 ABRAXAS2Q15018 415 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 TBCCQ15814 346 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 LCTLQ6UWM7 567 aa29.45■■■□□ 2.3
CCM2-219ENST00000544363 C2orf73Q8N5S3 287 aaPredicted RBP29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms