RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 SYNPO2LQ9H987 977 aa9.38□□□□□ -0.91
YBX3-212ENST00000542002 PDE7BQ9NP56 450 aa9.38□□□□□ -0.91
YBX3-212ENST00000542002 SOHLH2Q9NX45 425 aa9.38□□□□□ -0.91
YBX3-212ENST00000542002 TAS2R13Q9NYV9 303 aa9.38□□□□□ -0.91
YBX3-212ENST00000542002 IL17BQ9UHF5 180 aa9.38□□□□□ -0.91
YBX3-212ENST00000542002 RARRES3Q9UL19 164 aa9.38□□□□□ -0.91
YBX3-212ENST00000542002 SLC39A10Q9ULF5 831 aa9.38□□□□□ -0.91
YBX3-212ENST00000542002 MTO1Q9Y2Z2 717 aaKnown RBP9.38□□□□□ -0.91
YBX3-212ENST00000542002 PCDHB11Q9Y5F2 797 aa9.38□□□□□ -0.91
YBX3-212ENST00000542002 ADAMTS20P59510 1910 aa9.38□□□□□ -0.91
YBX3-212ENST00000542002 SDK2Q58EX2 2172 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 IGKV1-8A0A0C4DH67 115 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 FAM159BA6NKW6 160 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 TMEM150CB9EJG8 249 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 FAM155BO75949 473 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 SLC16A8O95907 504 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 MSL3P1P0C860 447 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 CBSLP0DN79 551 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 MAGP20916 626 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 MAP4P27816 1152 aaKnown RBP9.37□□□□□ -0.91
YBX3-212ENST00000542002 CBSP35520 551 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 CCNFP41002 786 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 STAT5AP42229 794 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 SKIV2L2P42285 1042 aaKnown RBP9.37□□□□□ -0.91
YBX3-212ENST00000542002 TMPRSS3P57727 454 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 TAS2R39P59534 338 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 CAV1Q03135 178 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 ZNF460Q14592 562 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 SF1Q15637 639 aaKnown RBP9.37□□□□□ -0.91
YBX3-212ENST00000542002 PHKG1Q16816 387 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 DEFB110Q30KQ9 67 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 TMTC4Q5T4D3 741 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 BROXQ5VW32 411 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 C8orf74Q6P047 294 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 TTC23LQ6PF05 361 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 SUSD1Q6UWL2 747 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 MBOAT1Q6ZNC8 495 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 CYS1Q717R9 158 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 GPR155Q7Z3F1 870 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 BPHLQ86WA6 291 aaPredicted RBP9.37□□□□□ -0.91
YBX3-212ENST00000542002 CCDC25Q86WR0 208 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 IL22RA1Q8N6P7 574 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 C19orf47Q8N9M1 422 aaKnown RBP9.37□□□□□ -0.91
YBX3-212ENST00000542002 KIF18AQ8NI77 898 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 ZNF480Q8WV37 535 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 ANKRD49Q8WVL7 239 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 TCTN2Q96GX1 697 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 MIPEPQ99797 713 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 SLC12A9Q9BXP2 914 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 CHRNA10Q9GZZ6 450 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 ZFATQ9P243 1243 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 LNPEPQ9UIQ6 1025 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 TRMT6Q9UJA5 497 aaKnown RBP9.37□□□□□ -0.91
YBX3-212ENST00000542002 PDE10AQ9Y233 779 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 PCDHGA4Q9Y5G9 962 aa9.37□□□□□ -0.91
YBX3-212ENST00000542002 MRPS18BQ9Y676 258 aaKnown RBP9.37□□□□□ -0.91
YBX3-212ENST00000542002 CTAGE15A4D2H0 777 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 E7ENX8 843 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 KIF2AO00139 706 aaPredicted RBP9.36□□□□□ -0.91
YBX3-212ENST00000542002 NDC80O14777 642 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 NKX2-8O15522 239 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 CTSVO60911 334 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 SCRG1O75711 98 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 WISP3O95389 354 aaPredicted RBP9.36□□□□□ -0.91
YBX3-212ENST00000542002 CTAGE8P0CG41 777 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 ENO3P13929 434 aaPredicted RBP9.36□□□□□ -0.91
YBX3-212ENST00000542002 SAT1P21673 171 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 OAS2P29728 719 aaKnown RBP9.36□□□□□ -0.91
YBX3-212ENST00000542002 GMPRP36959 345 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 PNLIPRP1P54315 467 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 UCNP55089 124 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 TAP2Q03519 686 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 ABHD18Q0P651 414 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 GPS2Q13227 327 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 MAP7Q14244 749 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 TTLL9Q3SXZ7 439 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 KBTBD12Q3ZCT8 623 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 SOWAHCQ53LP3 525 aaPredicted RBP9.36□□□□□ -0.91
YBX3-212ENST00000542002 FAM69BQ5VUD6 431 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 FBXO42Q6P3S6 717 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 FIGLAQ6QHK4 219 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 ZNF517Q6ZMY9 492 aaPredicted RBP9.36□□□□□ -0.91
YBX3-212ENST00000542002 UBE2R2Q712K3 238 aaPredicted RBP9.36□□□□□ -0.91
YBX3-212ENST00000542002 CTAGE6Q86UF2 777 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 SLC26A11Q86WA9 606 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 MCATQ8IVS2 390 aaKnown RBP9.36□□□□□ -0.91
YBX3-212ENST00000542002 TMEM151BQ8IW70 566 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 CTAGE4Q8IX94 777 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 FBXO15Q8NCQ5 510 aaPredicted RBP9.36□□□□□ -0.91
YBX3-212ENST00000542002 OR2L3Q8NG85 312 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 MAGEC3Q8TD91 643 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 LINGO1Q96FE5 620 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 FCRL4Q96PJ5 515 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 ACAT2Q9BWD1 397 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 CAB39LQ9H9S4 337 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 SLC6A20Q9NP91 592 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 LHX9Q9NQ69 397 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 STARD5Q9NSY2 213 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 CROTQ9UKG9 612 aa9.36□□□□□ -0.91
YBX3-212ENST00000542002 PADI1Q9ULC6 663 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms