RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SLC35A2P78381 396 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 EPS8Q12929 822 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 OXA1LQ15070 435 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 KDM4DQ6B0I6 523 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 GCNT7Q6ZNI0 430 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 RASGRP3Q8IV61 690 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 SLC22A15Q8IZD6 547 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 RBFAQ8N0V3 343 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 ZBTB2Q8N680 514 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 OR6K2Q8NGY2 324 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 MIPOL1Q8TD10 442 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 PYURFQ96I23 114 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 MAGED4Q96JG8 741 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 FAM193BQ96PV7 902 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 ALPK1Q96QP1 1244 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 OR52E6Q96RD3 313 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF300Q96RE9 604 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 MTRRQ9UBK8 725 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 OPTCQ9UBM4 332 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 INTS6Q9UL03 887 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 TMPRSS11EQ9UL52 423 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 DGKBQ9Y6T7 804 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 SCAMP3O14828 347 aaKnown RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 YY2O15391 372 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 CLDN7O95471 211 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 MYCLP1P12525 358 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 HNF1BP35680 557 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 CSKP41240 450 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 TWF1Q12792 350 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 SPIDRQ14159 915 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 NR1D2Q14995 579 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 CYP2A13Q16696 494 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 CRTC3Q6UUV7 619 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 Q6ZNB5 142 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 APCDD1Q8J025 514 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 PGBD3Q8N328 593 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 VMP1Q96GC9 406 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 EGLN2Q96KS0 407 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 TMEM175Q9BSA9 504 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 TTPALQ9BTX7 342 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 SLC29A3Q9BZD2 475 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 CLPBQ9H078 707 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 RAD21L1Q9H4I0 556 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 SIRT5Q9NXA8 310 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ERVK-18Q9QC07 812 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 DOLKQ9UPQ8 538 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 WNT9AO14904 365 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 PFDN6O15212 129 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 HS6ST1O60243 411 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 LILRB3O75022 631 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ULK1O75385 1050 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ERN1O75460 977 aaKnown RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 GSNP06396 782 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 IRF1P10914 325 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF7P17097 686 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 SLC6A12P48065 614 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 MTAPQ13126 283 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 BOP1Q14137 746 aaKnown RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 LAPTM4AQ15012 233 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 CHRNA6Q15825 494 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 PTRHD1Q6GMV3 140 aaKnown RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 TSEN54Q7Z6J9 526 aaKnown RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 TSPAN33Q86UF1 283 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 PTOV1Q86YD1 416 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 CPA6Q8N4T0 437 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ZBTB8BQ8NAP8 495 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 DDHD1Q8NEL9 900 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 NDNFQ8TB73 568 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 FAM162AQ96A26 154 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 TESCQ96BS2 214 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF641Q96N77 438 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 NODALQ96S42 347 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF347Q96SE7 839 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 DGCR6LQ9BY27 220 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 GPR63Q9BZJ6 419 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 CLEC4EQ9ULY5 219 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 XIRP2A4UGR9 3374 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 KRT87PA6NCN2 255 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 SEC22BO75396 215 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 DNAJB5O75953 348 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ARHGEF15O94989 841 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 OCM2P0CE71 109 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 OCMP0CE72 109 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 TGFBR2P37173 567 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 MAP2K4P45985 399 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 PRMT2P55345 433 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 RPS3AP61247 264 aaKnown RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 RPS14P62263 151 aaKnown RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 MAD2L1Q13257 205 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 IL18R1Q13478 541 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 GGTA1PQ4G0N0 100 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 SGO1Q5FBB7 561 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 NEK5Q6P3R8 708 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ANKS3Q6ZW76 656 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ANKRD46Q86W74 232 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 BEND7Q8N7W2 519 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-212ENST00000541284 ARL10Q8N8L6 244 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 KLHL23Q8NBE8 558 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 GPR26Q8NDV2 337 aa9.29□□□□□ -0.92
CNOT4-212ENST00000541284 APOL5Q9BWW9 433 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms