RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 NUDT6P53370 316 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 CYP4F2P78329 520 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 CPSF6Q16630 551 aaKnown RBP eCLIP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 RFX4Q33E94 735 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 UBE2UQ5VVX9 321 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 GPR153Q6NV75 609 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 LINC00299Q6ZSB3 139 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 CYP2U1Q7Z449 544 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 CCDC103Q8IW40 242 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 METTL4Q8N3J2 472 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 PARP16Q8N5Y8 322 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 KCNJ9Q92806 393 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 CCSER2Q9H7U1 834 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 SP140LQ9H930 580 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 LRTM1Q9HBL6 345 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 SCML2Q9UQR0 700 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 TMEM98Q9Y2Y6 226 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 METTL15A6NJ78 407 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 DRGXA6NNA5 263 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 RAD51BO15315 384 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 RGS14O43566 566 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 NBNO60934 754 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 ULK1O75385 1050 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 IL6P05231 212 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 PTPN6P29350 595 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 SLC6A4P31645 630 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 TTPAP49638 278 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 RPS24P62847 133 aaKnown RBP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 RPP38P78345 283 aaKnown RBP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 FOXD4Q12950 439 aaPredicted RBP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 TP53BP2Q13625 1128 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 GDPD3Q7L5L3 318 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 ZNF598Q86UK7 904 aaKnown RBP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 RASAL3Q86YV0 1011 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 ENTHD1Q8IYW4 607 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 SLC16A10Q8TF71 515 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 EID2BQ96D98 161 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 PDLIM5Q96HC4 596 aaKnown RBP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 BCL7BQ9BQE9 202 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 MGME1Q9BQP7 344 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 CINPQ9BW66 212 aaPredicted RBP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 CIPCQ9C0C6 399 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 MAGIXQ9H6Y5 334 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 NEK6Q9HC98 313 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 SAMHD1Q9Y3Z3 626 aaKnown RBP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 TESMINQ9Y4I5 508 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 ANGPTL3Q9Y5C1 460 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 GOLGA8CPA6NN73 597 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 FAM220BPB1ANY3 271 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 M0R129 80 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 SLC19A1P41440 591 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 ARPP19P56211 112 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 KEAP1Q14145 624 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 USP39Q53GS9 565 aaKnown RBP13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 ZCCHC8Q6NZY4 707 aaKnown RBP13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 CCBE1Q6UXH8 406 aaPredicted RBP13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 LINGO4Q6UY18 593 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 PRSS48Q7RTY5 328 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 RNF175Q8N4F7 328 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 Q96MT0 163 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 KCNC2Q96PR1 638 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 CDADC1Q9BWV3 514 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 OR51E2Q9H255 320 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 KRT84Q9NSB2 600 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 TMEM45AQ9NWC5 275 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 C14orf119Q9NWQ9 140 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 KIF17Q9P2E2 1029 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 PPT2Q9UMR5 302 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 NOD1Q9Y239 953 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 LAMA2P24043 3122 aaKnown RBP13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 KRT87PA6NCN2 255 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 A8MV72 311 aaPredicted RBP13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 AP3D1O14617 1153 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 STX7O15400 261 aaKnown RBP13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 INSIG1O15503 277 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 GLUD1P00367 558 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 MAGEA2P43356 314 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 PLEKHG6Q3KR16 790 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 TPRG1LQ5T0D9 272 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 CACHD1Q5VU97 1274 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 RGMBQ6NW40 437 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 ITPAQ9BY32 194 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 RAI2Q9Y5P3 530 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 PRSS21Q9Y6M0 314 aa13.57□□□□□ -0.24
SCNN1A-215ENST00000540037 M0QZ92 97 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 FKBP9O95302 570 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 ZXDBP98169 803 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 ATG9BQ674R7 924 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 FKBP9P1Q75LS8 142 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 SLC38A4Q969I6 547 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 SH3GL1Q99961 368 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 APOL4Q9BPW4 351 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 CENPOQ9BU64 300 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 EMILIN2Q9BXX0 1053 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 ACPTQ9BZG2 426 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 IL1RAPQ9NPH3 570 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 SNX6Q9UNH7 406 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 RNF6Q9Y252 685 aa13.56□□□□□ -0.24
SCNN1A-215ENST00000540037 ARIH1Q9Y4X5 557 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms