RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 ZNF624Q9P2J8 865 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-212ENST00000539975 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.29□□□□□ -1.4
SNHG1-212ENST00000539975 SLC24A2Q9UI40 661 aa6.29□□□□□ -1.4
SNHG1-212ENST00000539975 ACOT9Q9Y305 439 aa6.29□□□□□ -1.4
SNHG1-212ENST00000539975 PCYT1BQ9Y5K3 369 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-212ENST00000539975 ENTPD2Q9Y5L3 495 aa6.29□□□□□ -1.4
SNHG1-212ENST00000539975 ST14Q9Y5Y6 855 aa6.29□□□□□ -1.4
SNHG1-212ENST00000539975 V9GYY5 206 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-212ENST00000539975 NUMA1Q14980 2115 aa6.29□□□□□ -1.4
SNHG1-212ENST00000539975 ANKRD36A6QL64 1941 aa6.29□□□□□ -1.4
SNHG1-212ENST00000539975 IGHV1OR21-1A0A087WYE8 117 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 A0A087X1B8 175 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 PIPSLA2A3N6 862 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 A6NCN8 305 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 OR6C74A6NCV1 312 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ISM1B1AKI9 464 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 SLC16A5O15375 505 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ITGA2BP08514 1039 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 SNRPAP09012 282 aaKnown RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ENO2P09104 434 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 FAM153BP0C7A2 387 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 JMJD7P0C870 316 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 KRT15P19012 456 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ECHS1P30084 290 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 SLC26A3P40879 764 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ABCG1P45844 678 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 SERPINB8P50452 374 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 RAB28P51157 221 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 INHBCP55103 352 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ATP6V0D1P61421 351 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 VSNL1P62760 191 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 UBE2IP63279 158 aaKnown RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 SP140Q13342 867 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 EIF3IQ13347 325 aaKnown RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 TRA2AQ13595 282 aaKnown RBP eCLIP6.28□□□□□ -1.42e-56■■■■□ 20.9
SNHG1-212ENST00000539975 TSTA3Q13630 321 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 NR1D2Q14995 579 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 NAA25Q14CX7 972 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 FAM83EQ2M2I3 478 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 FAM153CQ494X1 144 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ACSBG2Q5FVE4 666 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 EXOSC6Q5RKV6 272 aaKnown RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 TMTC4Q5T4D3 741 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 N4BP2L1Q5TBK1 243 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 THEMIS2Q5TEJ8 643 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 MROH9Q5TGP6 573 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 HES3Q5TGS1 186 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 NKAIN2Q5VXU1 208 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 TMEM71Q6P5X7 295 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ZNF549Q6P9A3 640 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 FBXO38Q6PIJ6 1188 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 PAQR3Q6TCH7 311 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 SLCO6A1Q86UG4 719 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ZNF761Q86XN6 746 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 CPNE9Q8IYJ1 553 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 LSMEM2Q8N112 164 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 CHCHD4Q8N4Q1 142 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 LILRA3Q8N6C8 439 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 LRRN4CLQ8ND94 238 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 OR4D9Q8NGE8 314 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 OR52E1Q8NGJ3 308 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 OR5AR1Q8NGP9 310 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 CD200R1Q8TD46 325 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 EEF1AKMT1Q8WVE0 214 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ATL1Q8WXF7 558 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 ANKRD7Q92527 254 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 CABS1Q96KC9 395 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 RMDN2Q96LZ7 410 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 CCDC138Q96M89 665 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 FRMD6Q96NE9 622 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 UBL7Q96S82 380 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 RUFY1Q96T51 708 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 CD180Q99467 661 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 PAFAH2Q99487 392 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 GPR22Q99680 433 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 EGFL8Q99944 293 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 WDR83Q9BRX9 315 aaKnown RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 TBC1D10AQ9BXI6 508 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 TMPRSS13Q9BYE2 586 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 TFB2MQ9H5Q4 396 aaKnown RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 CAAP1Q9H8G2 361 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 RDH14Q9HBH5 336 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 PARVBQ9HBI1 364 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 NMRAL1Q9HBL8 299 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 INTS7Q9NVH2 962 aaKnown RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 CTNNAL1Q9UBT7 734 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 FETUBQ9UGM5 382 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 KLHL3Q9UH77 587 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 MTO1Q9Y2Z2 717 aaKnown RBP6.28□□□□□ -1.4
SNHG1-212ENST00000539975 PSAT1Q9Y617 370 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 AK5Q9Y6K8 562 aa6.28□□□□□ -1.4
SNHG1-212ENST00000539975 CEP192Q8TEP8 1941 aa6.27□□□□□ -1.41
SNHG1-212ENST00000539975 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
SNHG1-212ENST00000539975 LOC100289279A0A1B0GTE1 492 aa6.27□□□□□ -1.41
SNHG1-212ENST00000539975 TLDC2A0PJX2 215 aa6.27□□□□□ -1.41
SNHG1-212ENST00000539975 OR5K3A6NET4 321 aa6.27□□□□□ -1.41
SNHG1-212ENST00000539975 GOLGA6L10A6NI86 522 aa6.27□□□□□ -1.41
SNHG1-212ENST00000539975 PRR19A6NJB7 356 aa6.27□□□□□ -1.41
SNHG1-212ENST00000539975 SYCE1LA8MT33 242 aa6.27□□□□□ -1.41
SNHG1-212ENST00000539975 A8MU76 341 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms