RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PYDC1Q8WXC3 89 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 C1orf109Q9NX04 203 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 STX18Q9P2W9 335 aaKnown RBP21.78■■□□□ 1.08
HOMER3-204ENST00000539827 ASF1AQ9Y294 204 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 KMOO15229 486 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 FUCA1P04066 466 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 ATXN3P54252 364 aaPredicted RBP21.78■■□□□ 1.08
HOMER3-204ENST00000539827 SLC34A1Q06495 639 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 CAPRIN1Q14444 709 aaKnown RBP21.78■■□□□ 1.08
HOMER3-204ENST00000539827 TIGD2Q4W5G0 525 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 PAGE3Q5JUK9 113 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 LIPJQ5W064 366 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 PDZD3Q86UT5 571 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 ZFAND4Q86XD8 727 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 LIX1Q8N485 282 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 TSPEARQ8WU66 669 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 GAS2L1Q99501 681 aaPredicted RBP21.78■■□□□ 1.08
HOMER3-204ENST00000539827 S100A14Q9HCY8 104 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 PLAGL1Q9UM63 463 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 NCKAP1Q9Y2A7 1128 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 SPTBN5Q9NRC6 3674 aaKnown RBP21.77■■□□□ 1.08
HOMER3-204ENST00000539827 ANKRD28O15084 1053 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 FKBP6O75344 327 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 ACADMP11310 421 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 TBPL1P62380 186 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 MAD2L1Q13257 205 aaPredicted RBP21.77■■□□□ 1.08
HOMER3-204ENST00000539827 SMU1Q2TAY7 513 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 FRG2Q64ET8 278 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 CHST15Q7LFX5 561 aaPredicted RBP21.77■■□□□ 1.08
HOMER3-204ENST00000539827 OXR1Q8N573 874 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 OR5AR1Q8NGP9 310 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 MRGPRX1Q96LB2 322 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 IL17FQ96PD4 163 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 FRG2BQ96QU4 278 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 UBE2ZQ9H832 354 aaPredicted RBP21.77■■□□□ 1.08
HOMER3-204ENST00000539827 SPAG4Q9NPE6 437 aa21.77■■□□□ 1.08
HOMER3-204ENST00000539827 DNMT3AQ9Y6K1 912 aaPredicted RBP21.77■■□□□ 1.08
HOMER3-204ENST00000539827 UNC80Q8N2C7 3258 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 SHISA7A6NL88 538 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 BAG2O95816 211 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 MYCLP1P12525 358 aaPredicted RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 VARSP26640 1264 aaKnown RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 SLC7A2P52569 658 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 AP2B1P63010 937 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 RPA4Q13156 261 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 TLR1Q15399 786 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 SKIV2LQ15477 1246 aaKnown RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 CAPN13Q6MZZ7 669 aaPredicted RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 UNC5DQ6UXZ4 953 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 HOMEZQ8IX15 550 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 PLCD3Q8N3E9 789 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 JADE3Q92613 823 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 MAGEB10Q96LZ2 347 aaPredicted RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 GPATCH1Q9BRR8 931 aaKnown RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 PREBQ9HCU5 417 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 TMEM181Q9P2C4 612 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 GMPR2Q9P2T1 348 aaKnown RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 MOSPD1Q9UJG1 213 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 SCML1Q9UN30 329 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 CFAP20Q9Y6A4 193 aaKnown RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 MYO10Q9HD67 2058 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 TMEM265A0A087WTH1 108 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 ANPEPP15144 967 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 NDUFV2P19404 249 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 CASP2P42575 452 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 PTDSS1P48651 473 aaKnown RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 GTF2A1P52655 376 aaPredicted RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 PRKG2Q13237 762 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 NFYCQ13952 458 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 PTGR1Q14914 329 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 TMEM31Q5JXX7 168 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 CACHD1Q5VU97 1274 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 METRNLQ641Q3 311 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 SUSD1Q6UWL2 747 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 FAM3CQ92520 227 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 TFGQ92734 400 aaPredicted RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 APOOQ9BUR5 198 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 C1QTNF7Q9BXJ2 289 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 GID8Q9NWU2 228 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 STOML1Q9UBI4 398 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 LEF1Q9UJU2 399 aaPredicted RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 FZD4Q9ULV1 537 aa21.76■■□□□ 1.07
HOMER3-204ENST00000539827 TDRKHQ9Y2W6 561 aaKnown RBP21.76■■□□□ 1.07
HOMER3-204ENST00000539827 FXYD1O00168 92 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 UGDHO60701 494 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 EEDO75530 441 aaKnown RBP21.75■■□□□ 1.07
HOMER3-204ENST00000539827 ACP5P13686 325 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 RPL10P27635 214 aaKnown RBP21.75■■□□□ 1.07
HOMER3-204ENST00000539827 DGKQP52824 942 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 YBX1P67809 324 aaKnown RBP21.75■■□□□ 1.07
HOMER3-204ENST00000539827 FLOT2Q14254 428 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 KIAA0040Q15053 153 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 MAP7D1Q3KQU3 841 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 COQ5Q5HYK3 327 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 EOGTQ5NDL2 527 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 GRHL2Q6ISB3 625 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 AAGABQ6PD74 315 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 CLHC1Q8NHS4 586 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 LRRC58Q96CX6 371 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 PHF7Q9BWX1 381 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms