RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 PSKH1P11801 424 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 NR2C1P13056 603 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 GADD45AP24522 165 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 SLC7A1P30825 629 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ADGRE1Q14246 886 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 CRB2Q5IJ48 1285 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 WASH2PQ6VEQ5 465 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 SATL1Q86VE3 508 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 UBE2J2Q8N2K1 259 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 TTLQ8NG68 377 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 SLC38A3Q99624 504 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 MIPEPQ99797 713 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ADAM7Q9H2U9 754 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 SRMSQ9H3Y6 488 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 SLC28A3Q9HAS3 691 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 SERINC1Q9NRX5 453 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 HPF1Q9NWY4 346 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 PCDHGC4Q9Y5F7 938 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 FAM234BA2RU67 622 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 TRIM64A6NGJ6 449 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ZSCAN5BA6NJL1 495 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ELOA3DA6NLF2 546 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-209ENST00000537178 AQP12BA6NM10 295 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 VSTM5A8MXK1 200 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 FFAR2O15552 330 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 KDM4BO94953 1096 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 WASP42768 502 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 OR2B6P58173 313 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 IL10RBQ08334 325 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ELOA3BQ3SY89 546 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 TMEM220Q6QAJ8 160 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 AQP12AQ8IXF9 295 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ELOA3Q8NG57 546 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 PPTC7Q8NI37 304 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 EBPLQ9BY08 206 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 TRPV4Q9HBA0 871 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 MALT1Q9UDY8 824 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 FAM198AQ9UFP1 575 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 DPPA5A6NC42 116 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 C9JVG2 144 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 GOT2P00505 430 aaKnown RBP10.43□□□□□ -0.74
CLIP1-209ENST00000537178 HSD3B2P26439 372 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 HSD17B2P37059 387 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 BLKP51451 505 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 PLA2G16P53816 162 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 IST1P53990 364 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 GRSF1Q12849 480 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLIP1-209ENST00000537178 TIGD6Q17RP2 521 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 DUSP28Q4G0W2 176 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF781Q8N8C0 355 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 OR2L2Q8NH16 312 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 IL31RAQ8NI17 732 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 HBEGFQ99075 208 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ADAP2Q9NPF8 381 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ABCG2Q9UNQ0 655 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 COL24A1Q17RW2 1714 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF726A6NNF4 738 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 CPNE3O75131 537 aaKnown RBP10.43□□□□□ -0.74
CLIP1-209ENST00000537178 CHRM5P08912 532 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-209ENST00000537178 NCK1P16333 377 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 HOXA10P31260 410 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-209ENST00000537178 MPIP34949 423 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 WSCD2Q2TBF2 565 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 PLEKHG6Q3KR16 790 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 OGFRL1Q5TC84 451 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ANO7Q6IWH7 933 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 RFWD3Q6PCD5 774 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 DNM1P34Q6PK57 102 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF627Q7L945 461 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ADGRD2Q7Z7M1 963 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 FAM129CQ86XR2 697 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 CEP97Q8IW35 865 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 PSKH2Q96QS6 385 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 LRRC3Q9BY71 257 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 B3GNT4Q9C0J1 378 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ZNF700Q9H0M5 742 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 ZCCHC3Q9NUD5 404 aaKnown RBP10.43□□□□□ -0.74
CLIP1-209ENST00000537178 POMPQ9Y244 141 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 CARD8Q9Y2G2 431 aa10.43□□□□□ -0.74
CLIP1-209ENST00000537178 TNRC6CQ9HCJ0 1690 aaKnown RBP10.43□□□□□ -0.74
CLIP1-209ENST00000537178 A8MUI8 341 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 ACOX3O15254 700 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 PRLP01236 227 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 GSTM3P21266 225 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 DEFA5Q01523 94 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 KIAA0930Q6ICG6 404 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 DPY19L2P1Q6NXN4 242 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 LINGO4Q6UY18 593 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SMG8Q8ND04 991 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 DMRTB1Q96MA1 342 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 WRAP53Q9BUR4 548 aaKnown RBP10.42□□□□□ -0.74
CLIP1-209ENST00000537178 HIPK3Q9H422 1215 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 A0A1W2PRB8 838 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SEPT4O43236 478 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 ARL6IP5O75915 188 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 AGR2O95994 175 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 GJB1P08034 283 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 SPATA31D3P0C874 917 aa10.42□□□□□ -0.74
CLIP1-209ENST00000537178 ALPPL2P10696 532 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms