RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 FEZF1A0PJY2 475 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 TSFMP43897 325 aaKnown RBP3.89□□□□□ -1.79
CCDC7-208ENST00000537047 ZFP36L2P47974 494 aaKnown RBP3.89□□□□□ -1.79
CCDC7-208ENST00000537047 LMOD3Q0VAK6 560 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 EFTUD2Q15029 972 aaKnown RBP eCLIP3.89□□□□□ -1.79
CCDC7-208ENST00000537047 ZNF74Q16587 644 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 ELFN2Q5R3F8 820 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 LCN1P1Q5VSP4 162 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 ZNF841Q6ZN19 808 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 EXOC8Q8IYI6 725 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 FBXO39Q8N4B4 442 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 KLHL30-AS1Q8NEE0 82 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 LRRC59Q96AG4 307 aaKnown RBP3.89□□□□□ -1.79
CCDC7-208ENST00000537047 C7orf26Q96N11 449 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 KIFC3Q9BVG8 833 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 KCNK15Q9H427 330 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 MYH16Q9H6N6 1097 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 HEXA-AS1Q9H8Q6 139 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 IRAK4Q9NWZ3 460 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 PLAGL1Q9UM63 463 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 GTF2A1LQ9UNN4 478 aa3.89□□□□□ -1.79
CCDC7-208ENST00000537047 FPGTO14772 594 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 PHF1O43189 567 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-208ENST00000537047 MED24O75448 989 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 SMIM18P0DKX4 95 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 HLA-FP30511 346 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 OXTRP30559 389 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 MNDAP41218 407 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 GARSP41250 739 aaKnown RBP3.88□□□□□ -1.79
CCDC7-208ENST00000537047 DLK1P80370 383 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 ODF4Q2M2E3 257 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 PDLIM3Q53GG5 364 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-208ENST00000537047 UGT3A1Q6NUS8 523 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 TIPARPQ7Z3E1 657 aaKnown RBP3.88□□□□□ -1.79
CCDC7-208ENST00000537047 HAUS6Q7Z4H7 955 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 PAPD5Q8NDF8 572 aaKnown RBP3.88□□□□□ -1.79
CCDC7-208ENST00000537047 USP6NLQ92738 828 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 C1orf147Q96MC9 270 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-208ENST00000537047 OLFM1Q99784 485 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 SLC26A6Q9BXS9 759 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 B3GAT2Q9NPZ5 323 aa3.88□□□□□ -1.79
CCDC7-208ENST00000537047 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.88□□□□□ -1.79
CCDC7-208ENST00000537047 ARID4BQ4LE39 1312 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-208ENST00000537047 GPRIN2O60269 458 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 PDHA2P29803 388 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 CXCL9Q07325 125 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 CRYMQ14894 314 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 EXT1Q16394 746 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 HAUS3Q68CZ6 603 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 TEX38Q6PEX7 206 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 TMCO3Q6UWJ1 677 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 SUMF1Q8NBK3 374 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 SCFD2Q8WU76 684 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 SPAG5Q96R06 1193 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 NKX3-1Q99801 234 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-208ENST00000537047 Q9N2K0 584 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 SPHK1Q9NYA1 384 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 CLIP2Q9UDT6 1046 aa3.87□□□□□ -1.79
CCDC7-208ENST00000537047 LOC105371242A0A075B767 164 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 ANKUB1A6NFN9 424 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 C2orf81A6NN90 581 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 CDRT15L2A8MXV6 281 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 SNURFLB1AK76 121 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 POP4O95707 220 aaKnown RBP3.86□□□□□ -1.79
CCDC7-208ENST00000537047 TM4SF1P30408 202 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 CAPGP40121 348 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 KRT32Q14532 448 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 HSP90AB4PQ58FF6 505 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 Q6ZVH6 145 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 G2E3Q7L622 706 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 CCDC107Q8WV48 283 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 UCMAQ8WVF2 138 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 CCDC3Q9BQI4 270 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 AASSQ9UDR5 926 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 GRIP1Q9Y3R0 1128 aa3.86□□□□□ -1.79
CCDC7-208ENST00000537047 COL4A4P53420 1690 aaPredicted RBP3.86□□□□□ -1.79
CCDC7-208ENST00000537047 LRRC72A6NJI9 287 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 G3V2L1 256 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 ACSL1P33121 698 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 SOX3P41225 446 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 IRF3Q14653 427 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 FAM189A2Q15884 450 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 CA9Q16790 459 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 TMPRSS11BQ86T26 416 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 FAM131BQ86XD5 332 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 RFT1Q96AA3 541 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 ZNF597Q96LX8 424 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 FAM20AQ96MK3 541 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 MAP3K3Q99759 626 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 OVOL2Q9BRP0 275 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 MIS12Q9H081 205 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 SPATC1LQ9H0A9 340 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 TUBB1Q9H4B7 451 aa3.85□□□□□ -1.79
CCDC7-208ENST00000537047 COL16A1Q07092 1604 aaPredicted RBP3.84□□□□□ -1.79
CCDC7-208ENST00000537047 SNAP91O60641 907 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 GALR3O60755 368 aaPredicted RBP3.84□□□□□ -1.79
CCDC7-208ENST00000537047 OR2T7P0C7T2 308 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 CSTF2P33240 577 aaKnown RBP eCLIP3.84□□□□□ -1.79
CCDC7-208ENST00000537047 ARL3P36405 182 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 HADHAP40939 763 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms