RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NRP1O14786 923 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GSRP00390 522 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PGK1P00558 417 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CTSHP09668 335 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 HTR7P34969 479 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 RPL35P42766 123 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 MAXP61244 160 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 NCS1P62166 190 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PMF1Q6P1K2 205 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM135Q86UB9 458 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ZFPM1Q8IX07 1006 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 OR8J3Q8NGG0 315 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 OR10Z1Q8NGY1 313 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ESAMQ96AP7 390 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PELOQ9BRX2 385 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 MRIQ9BWK5 157 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 FBRSL1Q9HCM7 1045 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PPIEQ9UNP9 301 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TNPO3Q9Y5L0 923 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 COL16A1Q07092 1604 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 AP3D1O14617 1153 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 SLC30A4O14863 429 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 MID1O15344 667 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 C1QBP02746 253 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 USP17L7P0C7H9 530 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 RORAP35398 523 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CAP2P40123 477 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PTPN9P43378 593 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GLUD2P49448 558 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CSTF1Q05048 431 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 NDUFAF6Q330K2 333 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PROX2Q3B8N5 592 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GPAT3Q53EU6 434 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 USP30Q70CQ3 517 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 SYVN1Q86TM6 617 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ZZZ3Q8IYH5 903 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GHDCQ8N2G8 530 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF384Q8TF68 577 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 LPAR1Q92633 364 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CDCA5Q96FF9 252 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ZFP42Q96MM3 310 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ZSWIM3Q96MP5 696 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TSSK3Q96PN8 268 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TCF25Q9BQ70 676 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 NXF3Q9H4D5 531 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 POLLQ9UGP5 575 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 INTS6Q9UL03 887 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PSAT1Q9Y617 370 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CBX4O00257 560 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 MT-ND2P03891 347 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 EPB42P16452 691 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CPN2P22792 545 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 GPR15P49685 360 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ASAH1Q13510 395 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PPP1R3AQ16821 1122 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CRTC2Q53ET0 693 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 IDNKQ5T6J7 187 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 MACC1Q6ZN28 852 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 C10orf53Q8N6V4 93 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CHDHQ8NE62 594 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 VANGL1Q8TAA9 524 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TRPM4Q8TD43 1214 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 DEDD2Q8WXF8 326 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CLIP3Q96DZ5 547 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 MNTQ99583 582 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 DPCDQ9BVM2 203 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PPIL3Q9H2H8 161 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PIGUQ9H490 435 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ANKRA2Q9H9E1 313 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TBC1D17Q9HA65 648 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ERVK13-1Q9NX77 482 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CMAHPQ9Y471 501 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CDK2AP1O14519 115 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 MAFO75444 373 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 STX11O75558 287 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ADORA2AP29274 412 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 NNMTP40261 264 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 FBXO47Q5MNV8 452 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PPP1R26Q5T8A7 1209 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TXNDC11Q6PKC3 985 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 METAP1DQ6UB28 335 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CXXC5Q7LFL8 322 aaKnown RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ANKRD46Q86W74 232 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 DAW1Q8N136 415 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 OR5H6Q8NGV6 325 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 SLC22A17Q8WUG5 538 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CHTF18Q8WVB6 975 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 UCK2Q9BZX2 261 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 ELOVL4Q9GZR5 314 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 FAM83DQ9H4H8 585 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 AKTIPQ9H8T0 292 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 PRDM5Q9NQX1 630 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-213ENST00000537002 TBC1D24Q9ULP9 559 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 LINC00862A6NCI5 91 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 METTL15A6NJ78 407 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 DLGAP1O14490 977 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 SGTAO43765 313 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 FKTNO75072 461 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 OR4F21O95013 312 aa5.28□□□□□ -1.56
PTPRD-213ENST00000537002 CCNDBP1O95273 360 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms