RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CIDEBQ9UHD4 219 aa17.25■□□□□ 0.35
TNFRSF1A-209ENST00000536717 PCDHGA6Q9Y5G7 932 aa17.25■□□□□ 0.35
TNFRSF1A-209ENST00000536717 NFS1Q9Y697 457 aa17.25■□□□□ 0.35
TNFRSF1A-209ENST00000536717 KDM1AO60341 852 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 ESR1P03372 595 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 RPN2P04844 631 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 TUBBP07437 444 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 F7P08709 466 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 SSTR1P30872 391 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 VSNL1P62760 191 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 MC1RQ01726 317 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 GBX1Q14549 363 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 HSP90AA5PQ58FG0 334 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 PLEKHS1Q5SXH7 462 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 ZNF470Q6ECI4 717 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 C16orf46Q6P387 395 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 C3orf62Q6ZUJ4 267 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 GSPT2Q8IYD1 628 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 C19orf47Q8N9M1 422 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 LMNTD1Q8N9Z9 388 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 FAM136AQ96C01 138 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 PLAC1Q9HBJ0 212 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 GALPQ9UBC7 116 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 KCND3Q9UK17 655 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 RUVBL2Q9Y230 463 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 PCDHB3Q9Y5E6 796 aa17.24■□□□□ 0.35
TNFRSF1A-209ENST00000536717 A0A0J9YY10 115 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 ISM1B1AKI9 464 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 HCRTR1O43613 425 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 KATNA1O75449 491 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 S1PR4O95977 384 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 ERVK-10P10266 1014 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 GABRA4P48169 554 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 KIR2DS3Q14952 304 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 TRMT10BQ6PF06 316 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 DENND6AQ8IWF6 608 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 LRFN5Q96NI6 719 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 IL17FQ96PD4 163 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 CHRNA10Q9GZZ6 450 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 LRRC4CQ9HCJ2 640 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 IARS2Q9NSE4 1012 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 VPS9D1Q9Y2B5 631 aa17.23■□□□□ 0.35
TNFRSF1A-209ENST00000536717 C21orf140B9A014 251 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 H3BMH7 237 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 H3BMM5 538 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 FURINP09958 794 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 MYBL2P10244 700 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 PKMP14618 531 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 CD9P21926 228 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 PHBP35232 272 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 MGAT5Q09328 741 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 CTBP1Q13363 440 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 SLC5A12Q1EHB4 618 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 CCSMST1Q4G0I0 132 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 FAM20CQ8IXL6 584 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 C2orf73Q8N5S3 287 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 CDKL2Q92772 493 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 PARD6BQ9BYG5 372 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 CDC42EP4Q9H3Q1 356 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 INTS10Q9NVR2 710 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 GEMIN8Q9NWZ8 242 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 MOCS1Q9NZB8 636 aa17.22■□□□□ 0.35
TNFRSF1A-209ENST00000536717 TCRBV9S1A1TA0A576 114 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 KRT87PA6NCN2 255 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 RASGRF2O14827 1237 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 MAP3K7O43318 606 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 CREG1O75629 220 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 C1orf105O95561 183 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 FAM153BP0C7A2 387 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 CHRM3P20309 590 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 STX2P32856 288 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 RORAP35398 523 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 BDKRB1P46663 353 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 POLE2P56282 527 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 GPX6P59796 221 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 ERV3-1Q14264 604 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 DEFB110Q30KQ9 67 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 FAM153CQ494X1 144 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 LCN10Q6JVE6 187 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 CYS1Q717R9 158 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 TAX1BP1Q86VP1 789 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 DSELQ8IZU8 1212 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 OR2L8Q8NGY9 312 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 SKA2Q8WVK7 121 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 MR1Q95460 341 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 RAD51AP1Q96B01 352 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 TCTN2Q96GX1 697 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 FBXO6Q9NRD1 293 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 STARD5Q9NSY2 213 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 PCMTD2Q9NV79 361 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 NINJ2Q9NZG7 142 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 ZFATQ9P243 1243 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 SERTAD3Q9UJW9 196 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 FBXO5Q9UKT4 447 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 MED16Q9Y2X0 877 aa17.21■□□□□ 0.35
TNFRSF1A-209ENST00000536717 B8ZZF3 427 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 MEN1O00255 615 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 MATN4O95460 622 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CYP2A7P20853 494 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SLC1A2P43004 574 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms