RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 LUZP4Q9P127 313 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 MED16Q9Y2X0 877 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 KLK4Q9Y5K2 254 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 COMMD10Q9Y6G5 202 aa12□□□□□ -0.49
PRKDC-207ENST00000536483 SPTBP11277 2137 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 GSAPA4D1B5 854 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 CTAGE9A4FU28 777 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 C1orf105O95561 183 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 TTC4O95801 387 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 RNF224P0DH78 156 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 PKMP14618 531 aaKnown RBP11.99□□□□□ -0.49
PRKDC-207ENST00000536483 UGT2B7P16662 529 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 CD9P21926 228 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 CCNFP41002 786 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 ABRQ12979 859 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 MORF4L2Q15014 288 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 PPP1R7Q15435 360 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 INPP5JQ15735 1006 aaPredicted RBP11.99□□□□□ -0.49
PRKDC-207ENST00000536483 LONRF1Q17RB8 773 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 PRR30Q53SZ7 412 aaPredicted RBP11.99□□□□□ -0.49
PRKDC-207ENST00000536483 NEK10Q6ZWH5 1172 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 GALNT7Q86SF2 657 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 DSELQ8IZU8 1212 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 LINC01555Q8NAE3 123 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 FDCSPQ8NFU4 85 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 OR2L8Q8NGY9 312 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 SSC4DQ8WTU2 575 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 KCNJ9Q92806 393 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 RAD51AP1Q96B01 352 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 SLC22A18Q96BI1 424 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 CLIP3Q96DZ5 547 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 TCTN2Q96GX1 697 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 TRIM56Q9BRZ2 755 aaKnown RBP11.99□□□□□ -0.49
PRKDC-207ENST00000536483 RAB11FIP5Q9BXF6 653 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 SPHK1Q9NYA1 384 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 SNX7Q9UNH6 387 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 ZNF451Q9Y4E5 1061 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 SHANK1Q9Y566 2161 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 UNC79Q9P2D8 2635 aa11.99□□□□□ -0.49
PRKDC-207ENST00000536483 PRRC2CQ9Y520 2896 aaKnown RBP11.98□□□□□ -0.49
PRKDC-207ENST00000536483 A0A0J9YY10 115 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 A6NL46 340 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 GOLGA8KD6RF30 607 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 GOLGA8TH3BQL2 631 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 GOLGA8MH3BSY2 632 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 RASGRF2O14827 1237 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 TP73O15350 636 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 MAP3K7O43318 606 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 CEACAM4O75871 244 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 RAB40ALP0C0E4 278 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 ERGP11308 486 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 PGAM1P18669 254 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 PEBP1P30086 187 aaKnown RBP11.98□□□□□ -0.49
PRKDC-207ENST00000536483 FMO4P31512 558 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 RORAP35398 523 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 CLCN7P51798 805 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 EIF3BP55884 814 aaKnown RBP11.98□□□□□ -0.49
PRKDC-207ENST00000536483 FRG1Q14331 258 aaKnown RBP11.98□□□□□ -0.49
PRKDC-207ENST00000536483 EIF2S3LQ2VIR3 472 aaKnown RBP11.98□□□□□ -0.49
PRKDC-207ENST00000536483 JMJD6Q6NYC1 403 aaPredicted RBP11.98□□□□□ -0.49
PRKDC-207ENST00000536483 CASC4Q6P4E1 433 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 CDHR3Q6ZTQ4 885 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 CNTN4Q8IWV2 1026 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 DNAJC22Q8N4W6 341 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 Q8NA96 180 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 FBXO15Q8NCQ5 510 aaPredicted RBP11.98□□□□□ -0.49
PRKDC-207ENST00000536483 OR1L3Q8NH93 324 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 MAGEC3Q8TD91 643 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 ZNF669Q96BR6 464 aaPredicted RBP11.98□□□□□ -0.49
PRKDC-207ENST00000536483 LRRC39Q96DD0 335 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 EBNA1BP2Q99848 306 aaKnown RBP11.98□□□□□ -0.49
PRKDC-207ENST00000536483 NUDT9Q9BW91 350 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 NLNQ9BYT8 704 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 FANCEQ9HB96 536 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 SLAMF7Q9NQ25 335 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 SERTAD3Q9UJW9 196 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 TCFL5Q9UL49 500 aa11.98□□□□□ -0.49
PRKDC-207ENST00000536483 SEC16AO15027 2179 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 A1L4Q6 167 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 TCP11X1B4DZS4 312 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 EIF3FO00303 357 aaPredicted RBP11.97□□□□□ -0.49
PRKDC-207ENST00000536483 DPM1O60762 260 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 NIPSNAP2O75323 286 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 PSIP1O75475 530 aaKnown RBP11.97□□□□□ -0.49
PRKDC-207ENST00000536483 CAPN1P07384 714 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 GCGRP47871 477 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 ITGA1P56199 1179 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 DR1Q01658 176 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 MRPL49Q13405 166 aaKnown RBP11.97□□□□□ -0.49
PRKDC-207ENST00000536483 THOC5Q13769 683 aaKnown RBP11.97□□□□□ -0.49
PRKDC-207ENST00000536483 CRYMQ14894 314 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 ZIC1Q15915 447 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 CYP2A13Q16696 494 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 ZNF470Q6ECI4 717 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 HIBCHQ6NVY1 386 aaPredicted RBP11.97□□□□□ -0.49
PRKDC-207ENST00000536483 ZNF549Q6P9A3 640 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 TTC23LQ6PF05 361 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 KIAA0408Q6ZU52 694 aa11.97□□□□□ -0.49
PRKDC-207ENST00000536483 DENND6AQ8IWF6 608 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms