RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 NIT2Q9NQR4 276 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 COPZ2Q9P299 210 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 NLKQ9UBE8 527 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SLC9A2Q9UBY0 812 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MGAT4AQ9UM21 535 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 TBX20Q9UMR3 447 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PPIEQ9UNP9 301 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 PCDHB14Q9Y5E9 798 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 KCNMB2Q9Y691 235 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CEP350Q5VT06 3117 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 NAV1Q8NEY1 1877 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 A0A096LPK6 155 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 LOC102723532A0A0G2JNH3 316 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 LINC00862A6NCI5 91 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 FAM159BA6NKW6 160 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 LRRTM2O43300 516 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 TRIM13O60858 407 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 WBP4O75554 376 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 GRAP2O75791 330 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 KDM4BO94953 1096 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 DIRAS1O95057 198 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MED26O95402 600 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 AHSGP02765 367 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ALPLP05186 524 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 HOXC6P09630 235 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ZNF806P0C7X5 589 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 EDN3P14138 238 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 DARSP14868 501 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 SMPD1P17405 629 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CAPN3P20807 821 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MGAT1P26572 445 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MAOBP27338 520 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ACADLP28330 430 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ERP29P30040 261 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 HOXA7P31268 230 aaPredicted RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 CTHP32929 405 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 HTR7P34969 479 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 GP5P40197 560 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 NNMTP40261 264 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 HNF4AP41235 474 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CRKP46108 304 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 KCNJ5P48544 419 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 OR4D2P58180 307 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ISL1P61371 349 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CYP4F8P98187 520 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CREMQ03060 361 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SPIRE1Q08AE8 756 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SCRN3Q0VDG4 424 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CDK5R2Q13319 367 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ZNF79Q15937 498 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 NKG7Q16617 165 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 RFX4Q33E94 735 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SPANXN2Q5MJ10 180 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MARCH8Q5T0T0 291 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 GPR158Q5T848 1215 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ARHGEF16Q5VV41 709 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 GPAT2Q6NUI2 795 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ANKRD54Q6NXT1 300 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 FAM92BQ6ZTR7 304 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ZNF767PQ75MW2 155 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 BEND5Q7L4P6 421 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 DNAJB7Q7Z6W7 309 aaPredicted RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 KIAA0907Q7Z7F0 614 aaPredicted RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 RNF180Q86T96 592 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PGBD5Q8N414 524 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 KCTD6Q8NC69 237 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 OR4D10Q8NGI6 311 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 OR52N1Q8NH53 320 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 WDR36Q8NI36 951 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 TEX47Q8TBZ9 253 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PTP4A1Q93096 173 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 YIPF5Q969M3 257 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 RELTQ969Z4 430 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SGK3Q96BR1 496 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 C19orf60Q96EN9 201 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 RHOVQ96L33 236 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 DCLRE1CQ96SD1 692 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 EIF2AK1Q9BQI3 630 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 CRB3Q9BUF7 120 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 GPR63Q9BZJ6 419 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 AP5M1Q9H0R1 490 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 OSBPL2Q9H1P3 480 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 KAT8Q9H7Z6 458 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 TNFRSF10DQ9UBN6 386 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PLCL2Q9UPR0 1127 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ACOT9Q9Y305 439 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 COMMD10Q9Y6G5 202 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 LOC100130705A0A1B0GUX0 176 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF487B1APH4 448 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 M0R082 166 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RFXAPO00287 272 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TULP3O75386 442 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 EIF3GO75821 320 aaKnown RBP eCLIP3.63□□□□□ -1.83
MCF2-210ENST00000536274 OAZ2O95190 189 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 FOSP01100 380 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 ATP5BP06576 529 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 SNRPB2P08579 225 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 ALDOCP09972 364 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PEPDP12955 493 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF3P17036 446 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms